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A

a0 - Variable in class org.hkijena.jipipe.ui.grapheditor.connections.RectangularLine
 
a1 - Variable in class org.hkijena.jipipe.ui.grapheditor.connections.RectangularLine
 
AbsoluteColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a abs(x) function
AbsoluteColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.AbsoluteColumnOperation
 
accept(Object) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDummyParameterCollection
 
accept(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.ContextAction
 
accept(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.ui.grapheditor.layout.MSTGraphAutoLayoutMethod
 
accept(JIPipeGraphCanvasUI) - Method in class org.hkijena.jipipe.ui.grapheditor.layout.SugiyamaGraphAutoLayoutMethod
 
accepts(JIPipeData) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Returns true if the slot can carry the provided data.
accepts(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Returns true if the slot can carry the provided data.
AccumulateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
AccumulateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.AccumulateFunction
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.parameters.ExpressionTesterJIPipeMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.parameters.ParameterTesterJIPipeMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.plots.NewPlotJIPipeMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.extensions.tables.NewTableJIPipeMenuExtension
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.ColorChooserButton
 
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.HTMLEditor.StrikeThroughAction
Toggles the strikethrough attribute.
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.HTMLEditor.SubscriptAction
Toggles the strikethrough attribute.
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.components.HTMLEditor.SuperscriptAction
Toggles the strikethrough attribute.
actionPerformed(ActionEvent) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
activate() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.maskdrawer.EllipseMaskDrawerTool
 
activate() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.maskdrawer.FloodFillMaskDrawerTool
 
activate() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.maskdrawer.MaskDrawerTool
 
activate() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.maskdrawer.MouseMaskDrawerTool
 
activate() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.maskdrawer.PencilMaskDrawerTool
 
activate() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.maskdrawer.PolygonMaskDrawerTool
 
activate() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.maskdrawer.RectangleMaskDrawerTool
 
ActivateUpdateSiteRun - Class in org.hkijena.jipipe.ui.ijupdater
 
ActivateUpdateSiteRun(FilesCollection, List<UpdateSite>) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ActivateUpdateSiteRun
 
AdaptiveParameterBuilder - Class in org.hkijena.jipipe.ui.parameters
 
AdaptiveParameterBuilder(JIPipeWorkbench, JIPipeParameterCollection) - Constructor for class org.hkijena.jipipe.ui.parameters.AdaptiveParameterBuilder
 
AdaptiveParameterBuilder.ConditionValuePair - Class in org.hkijena.jipipe.ui.parameters
 
AdaptiveParameterBuilder.ConditionValuePairUI - Class in org.hkijena.jipipe.ui.parameters
 
add(JIPipeProject, JIPipeDataSlot, JIPipeExportedDataTable) - Method in class org.hkijena.jipipe.api.data.JIPipeMergedExportedDataTable
add(JIPipeParameterCollection, String, JIPipeParameterTree.Node) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree
Adds a new JIPipeParameterCollection into this collection.
add(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageSliceIndex
Adds the value to all components
add(JIPipeProject, JIPipeDataSlot) - Method in class org.hkijena.jipipe.ui.cache.JIPipeMergedDataSlotTableModel
add(Point) - Method in class org.hkijena.jipipe.utils.PointRange
Adds the point's x and y coordinates to all points
ADD_MASK_QUALIFIER - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.ImageJAlgorithmsExtension
Conversion rules that convert any input data type into their respective mask data type
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.PathEditor
Adds a listener for when the path property changes
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.FancyPasswordField
Adds a listener for when the search text changes
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.FancyTextField
Adds a listener for when the search text changes
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.PathEditor
Adds a listener for when the path property changes
addActionListener(ActionListener) - Method in class org.hkijena.jipipe.ui.components.SearchTextField
Adds a listener for when the search text changes
addAdaptiveParameterAssistant(JIPipeWorkbench) - Method in class org.hkijena.jipipe.api.nodes.JIPipeAdaptiveParameterSettings
 
addAlgorithm(JsonNodeInfo) - Method in class org.hkijena.jipipe.JIPipeJsonExtension
Adds a new node type of specified type
AddAlgorithmSlotPanel - Class in org.hkijena.jipipe.ui.components
UI that adds slots to an algorithm
AddAlgorithmSlotPanel(JIPipeGraphNode, JIPipeSlotType, JIPipeGraphHistory) - Constructor for class org.hkijena.jipipe.ui.components.AddAlgorithmSlotPanel
 
addAnnotation(Annotation) - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
 
addAnnotationColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
Adds a new column that contains annotation data and returns its index- If the column already exists, its index is returned.
AddAnnotationColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.algorithms
Algorithm that integrates columns
AddAnnotationColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.AddAnnotationColumnsAlgorithm
Creates a new instance
AddAnnotationColumnsAlgorithm(AddAnnotationColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.AddAnnotationColumnsAlgorithm
Creates a copy
addAnnotationIfEnabled(Collection<JIPipeAnnotation>, String) - Method in class org.hkijena.jipipe.extensions.parameters.primitives.OptionalAnnotationNameParameter
Adds the annotation with given value of the parameter is enabled
addAnnotationIfEnabled(Collection<JIPipeAnnotation>, String[]) - Method in class org.hkijena.jipipe.extensions.parameters.primitives.OptionalAnnotationNameParameter
Adds the annotation with given value of the parameter is enabled
addAnnotationIfEnabled(Collection<JIPipeAnnotation>, Collection<String>) - Method in class org.hkijena.jipipe.extensions.parameters.primitives.OptionalAnnotationNameParameter
Adds the annotation with given value of the parameter is enabled
addAnnotationIfEnabled(Collection<JIPipeDataAnnotation>, JIPipeData) - Method in class org.hkijena.jipipe.extensions.parameters.primitives.OptionalDataAnnotationNameParameter
Adds the annotation with given value of the parameter is enabled
addAnnotationToAllData(JIPipeAnnotation, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Adds an annotation to all existing data
addButton(String, ActionListener) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
addChild(String, JIPipeParameterTree.Node) - Method in class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.Node
 
addChoosableFileFilter(FileNameExtensionFilter) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
addColumn() - Method in class org.hkijena.jipipe.extensions.parameters.matrix.Matrix2D
Adds a new column
addColumn(ParameterTable.ParameterColumn, Object) - Method in class org.hkijena.jipipe.extensions.parameters.table.ParameterTable
Adds a new column to the table
addColumn(String, boolean) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a column with the given name.
addColumn(String, TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a column with the given name.
addColumn(Component) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.FormPanel.GroupHeaderPanel
Adds an additional component on the right hand side
addColumn(Component) - Method in class org.hkijena.jipipe.ui.components.FormPanel.GroupHeaderPanel
Adds an additional component on the right hand side
addColumns(Collection<ResultsTableData>, boolean, TableColumnNormalization) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds columns from another table
addCompartment(String) - Method in class org.hkijena.jipipe.api.JIPipeProject
Adds a new project compartment
addCompartment(JIPipeProjectCompartment, UUID) - Method in class org.hkijena.jipipe.api.JIPipeProject
Adds an existing compartment instance
AddCompartmentGraphHistorySnapshot - Class in org.hkijena.jipipe.api.history
 
AddCompartmentGraphHistorySnapshot(JIPipeProject, String) - Constructor for class org.hkijena.jipipe.api.history.AddCompartmentGraphHistorySnapshot
 
addContent(GraphNodeParameterReference) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
Adds a new element into the group.
addContent(Collection<GraphNodeParameterReference>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameterReferenceGroup
Adds multiple elements.
addCustomEntriesToTable(UIDefaults) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.ModernMetalTheme
Add this theme's custom entries to the defaults table.
addCustomEntriesToTable(UIDefaults) - Method in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
Add this theme's custom entries to the defaults table.
addCustomEntriesToTable(UIDefaults) - Method in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
Add this theme's custom entries to the defaults table.
addData(JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Adds a data row
addData(JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Adds a data row
addData(JIPipeDataSlot, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Copies the source slot into this slot.
addData(JIPipeVirtualData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Adds data as virtual data reference
addData(JIPipeVirtualData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Adds data as virtual data reference
AddDynamicParameterPanel - Class in org.hkijena.jipipe.ui.components
UI that adds slots to an algorithm
AddDynamicParameterPanel(JIPipeDynamicParameterCollection) - Constructor for class org.hkijena.jipipe.ui.components.AddDynamicParameterPanel
 
addEmptySlot(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Ensures that the specified slot is registered to the data batch
addEntry(UserFriendlyErrorUI.Entry) - Method in class org.hkijena.jipipe.ui.components.UserFriendlyErrorUI
Adds an entry to the UI
addErrorUI() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow
 
addErrorUI() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedROIListDataViewerWindow
 
addErrorUI() - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
addErrorUI() - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
addErrorUI() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
addErrorUI() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Instruction to add the error UI
addEscapeListener(JDialog) - Static method in class org.hkijena.jipipe.utils.UIUtils
Makes a JDialog close when the escape key is hit
addFillerGridBagComponent(Container, int, int) - Static method in class org.hkijena.jipipe.utils.UIUtils
Equivalent of Box.verticalGlue() for GridBagLayout
addFromAnnotations(Class<? extends JIPipeGraphNode>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds slots from parameter annotations (with autoCreate)
addGlobalAnnotation(JIPipeAnnotation, JIPipeAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Adds an annotation to the annotation list
addGlobalAnnotation(JIPipeAnnotation, JIPipeAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Adds an annotation to the annotation list
addGlobalAnnotations(Collection<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Adds annotations to the global annotation storage of this interface.
addGlobalAnnotations(Map<String, String>, JIPipeAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Adds annotations to the global annotation storage of this interface.
addGlobalAnnotations(List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Adds annotations to the global annotation storage of this interface.
addGlobalDataAnnotation(JIPipeDataAnnotation, JIPipeDataAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Adds an annotation to the annotation list
addGlobalDataAnnotation(JIPipeDataAnnotation, JIPipeDataAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Adds an annotation to the annotation list
addGlobalDataAnnotations(Collection<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Adds annotations to the annotation list
addGlobalDataAnnotations(Collection<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Adds annotations to the annotation list
addGroupHeader(String, Icon) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.FormPanel
Adds a group header
addGroupHeader(String, Icon) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a group header
addGroups(Collection<GraphNodeParameterReferenceGroup>) - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameters
Adds multiple groups
addInputData(JIPipeDataSlot, int) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Adds the data row of a given slot.
addInputData(JIPipeDataSlot, Collection<Integer>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Adds the data row of a given slot.
addInputSlot(String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Adds a new input slot
addInputSlot(String, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an input slot
addInputSlot(String, Class<? extends JIPipeData>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an input slot
addInputSlot(String, Class<? extends JIPipeData>, boolean, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an input slot
addItem(Object) - Method in class org.hkijena.jipipe.ui.ijupdater.IJProgressAdapter
 
addItem(Object) - Method in class org.hkijena.jipipe.ui.ijupdater.ProgressAdapter
 
AdditionFunctionOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
 
AdditionFunctionOperator() - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.AdditionFunctionOperator
 
addLink(String, Icon, File) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
addLinkCategory(String) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
addMaxProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
addMessage(MessagePanel.MessageType, String, JButton) - Method in class org.hkijena.jipipe.ui.components.MessagePanel
 
addNameToColumnIdentifiers(DefaultTableModel, String) - Static method in class org.hkijena.jipipe.utils.TableUtils
Adds a name to columns
addNewGroup() - Method in class org.hkijena.jipipe.api.grouping.parameters.GraphNodeParameters
Adds a new empty group
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.collections.ListParameter
Adds a new instance of the content class Override this method for types that cannot be default-constructed
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.colors.ColorListParameter
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.primitives.DoubleList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.primitives.FloatList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.primitives.IntegerList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.primitives.LongList
 
addNewInstance() - Method in class org.hkijena.jipipe.extensions.parameters.primitives.StringList
 
AddNodeGraphHistorySnapshot - Class in org.hkijena.jipipe.api.history
 
AddNodeGraphHistorySnapshot(JIPipeGraph, Set<JIPipeGraphNode>) - Constructor for class org.hkijena.jipipe.api.history.AddNodeGraphHistorySnapshot
 
AddNoise2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise
Wrapper around ImageProcessor
AddNoise2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise.AddNoise2DAlgorithm
Instantiates a new node type.
AddNoise2DAlgorithm(AddNoise2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise.AddNoise2DAlgorithm
Instantiates a new node type.
addNumericColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a string column with the given name.
addOutputData(String, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(JIPipeDataSlot, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeDataSlot, JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeDataSlot, JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(String, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeVirtualData) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeAnnotation>, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeVirtualData, List<JIPipeAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(String, JIPipeVirtualData, JIPipeAnnotationMergeStrategy, List<JIPipeAnnotation>) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(JIPipeDataSlot, JIPipeVirtualData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
 
addOutputData(JIPipeDataSlot, JIPipeData, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeDataSlot, JIPipeVirtualData) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(String, JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations should be set up till this point
addOutputData(JIPipeDataSlot, JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, List<JIPipeDataAnnotation>, JIPipeDataAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeDataSlot, JIPipeData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputData(JIPipeDataSlot, JIPipeVirtualData, List<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
Writes output data into the provided slot Please note that annotations that are added to all annotations should be set up till this point
addOutputSlot(String, Class<? extends JIPipeData>, String, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Adds a new input slot
addOutputSlot(String, Class<? extends JIPipeData>, String) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an output slot
addOutputSlot(String, Class<? extends JIPipeData>, String, Map<Class<? extends JIPipeData>, Class<? extends JIPipeData>>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an output slot
addOutputSlot(String, Class<? extends JIPipeData>, String, Map<Class<? extends JIPipeData>, Class<? extends JIPipeData>>, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds an output slot
addParameter(JIPipeMutableParameterAccess) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Adds a new parameter.
addParameter(String, Class<?>) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Adds a new parameter
addParameter(String, Class<?>, String, String, Annotation...) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
 
addPopupMenuToComponent(AbstractButton, JPopupMenu) - Static method in class org.hkijena.jipipe.installer.linux.ui.utils.UIUtils
Adds an existing popup menu to a button
addPopupMenuToComponent(AbstractButton) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds a popup menu to a button.
addPopupMenuToComponent(AbstractButton, JPopupMenu) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button
addPostprocessorCode(StringBuilder, List<JIPipeDataSlot>) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
addPreset(Class<?>, ExternalEnvironment) - Method in class org.hkijena.jipipe.api.registries.JIPipeExternalEnvironmentRegistry
Adds a new preset into the storage of the environment class
addProgress(int) - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
addRecentJsonExtension(Path) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
Adds a JSON extension file to the list of recent JSON extensions
addRecentProject(Path) - Method in class org.hkijena.jipipe.extensions.settings.ProjectsSettings
Adds a project file to the list of recent projects
addReloadablePopupMenuToComponent(AbstractButton, JPopupMenu, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button Adds a function that is run before the popup is shown
addReloadableRightClickPopupMenuToComponent(AbstractButton, JPopupMenu, Runnable) - Static method in class org.hkijena.jipipe.utils.UIUtils
Adds an existing popup menu to a button Adds a function that is run before the popup is shown
AddROIToActiveJIPipeImageViewerDataDisplay - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
AddROIToActiveJIPipeImageViewerDataDisplay() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToActiveJIPipeImageViewerDataDisplay
 
AddROIToJIPipeImageViewerDataDisplay - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
AddROIToJIPipeImageViewerDataDisplay() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddROIToJIPipeImageViewerDataDisplay
 
addRow() - Method in class org.hkijena.jipipe.extensions.parameters.matrix.Matrix2D
Adds a new row
addRow(List<Object>) - Method in class org.hkijena.jipipe.extensions.parameters.table.ParameterTable
Adds a row with raw values.
addRow() - Method in class org.hkijena.jipipe.extensions.parameters.table.ParameterTable
Creates a new empty row
addRow(Map<String, Object>) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a new row and writes the provided values into the table
addRow() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a new row
addRowBuilder() - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a new row and returns a ResultsTableData.RowBuilder for setting values conveniently
addRows(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds multiple rows
addRows(ResultsTableData) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Merges another results table into this one
AddSaltAndPepperNoise2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise
Wrapper around ImageProcessor
AddSaltAndPepperNoise2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise.AddSaltAndPepperNoise2DAlgorithm
Instantiates a new node type.
AddSaltAndPepperNoise2DAlgorithm(AddSaltAndPepperNoise2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.noise.AddSaltAndPepperNoise2DAlgorithm
Instantiates a new node type.
addSeries(PlotDataSeries) - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Adds a new series into this plot
addSeries() - Method in class org.hkijena.jipipe.ui.plotbuilder.PlotEditor
Adds a new series
addSingletonTab(String, String, Icon, Component, boolean) - Method in class org.hkijena.jipipe.ui.components.DocumentTabPane
Adds a tab that can be silently closed and brought up again
addSingletonTab(String, String, Icon, Component, DocumentTabPane.CloseMode, boolean) - Method in class org.hkijena.jipipe.ui.components.DocumentTabPane
Adds a tab that can be silently closed and brought up again
addSlide(Component, String) - Method in class org.hkijena.jipipe.utils.ui.DotSlideshow
 
addSlot(String, JIPipeDataSlotInfo, boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Adds a slots
addSlot(JIPipeDataSlotInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Adds a slot
addSlot(String, JIPipeDataSlotInfo, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
addSlot(JIPipeDataSlotInfo, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
addSlot(String, JIPipeDataSlotInfo, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeIOSlotConfiguration
 
addSnapshotBefore(JIPipeAlgorithmGraphHistorySnapshot) - Method in class org.hkijena.jipipe.api.history.JIPipeGraphHistory
Adds a snapshot into the stack
addStatisticsRow(ResultsTableData, ImageStatistics, ImageStatisticsSetParameter, Collection<ImageSliceIndex>, int, int, int) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze.ImageStatisticsAlgorithm
 
addStop(float, Color) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.LUTData
 
addStringColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds a string column with the given name.
addTab(String, Icon, Component, DocumentTabPane.CloseMode, boolean) - Method in class org.hkijena.jipipe.ui.components.DocumentTabPane
Adds a new tab
addTab(String, Icon, Component, DocumentTabPane.CloseMode) - Method in class org.hkijena.jipipe.ui.components.DocumentTabPane
Adds a new tab
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.JIPipeExportedDataTable
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.api.data.JIPipeMergedExportedDataTable
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.parameters.matrix.Matrix2D
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.parameters.table.ParameterTable
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.batchassistant.DataBatchTableModel
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.cache.JIPipeDataSlotTableModel
 
addTableModelListener(TableModelListener) - Method in class org.hkijena.jipipe.ui.cache.JIPipeMergedDataSlotTableModel
 
AddTemplateContextMenuAction - Class in org.hkijena.jipipe.extensions.nodetemplate
 
AddTemplateContextMenuAction() - Constructor for class org.hkijena.jipipe.extensions.nodetemplate.AddTemplateContextMenuAction
 
addText(String) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
addText(String, SimpleAttributeSet) - Method in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
addTo(JIPipeProject, String) - Method in class org.hkijena.jipipe.api.compartments.JIPipeExportedCompartment
Adds the compartment to a project as the specified compartment name
addToForm(T, MarkdownDocument) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.FormPanel
Adds a component to the form
addToForm(T, Component, MarkdownDocument) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.FormPanel
Adds a component to the form
addToForm(T, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component to the form
addToForm(T, Component, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component to the form
addToken(char[], int, int, int, int, boolean) - Method in class org.hkijena.jipipe.extensions.r.ui.RTokenMaker
Adds the token specified to the current linked list of tokens.
addToMajor(int, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.connections.NonCollidingRectangularLineDrawer
 
addToMajor(int) - Method in class org.hkijena.jipipe.ui.grapheditor.connections.RectangularLineDrawer
 
addToMinor(int, boolean) - Method in class org.hkijena.jipipe.ui.grapheditor.connections.NonCollidingRectangularLineDrawer
 
addToMinor(int) - Method in class org.hkijena.jipipe.ui.grapheditor.connections.RectangularLineDrawer
 
addToRoiManager(RoiManager) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Adds the ROI to an existing ROI manager instance
AddToROIManagerDataDisplay - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
AddToROIManagerDataDisplay() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.AddToROIManagerDataDisplay
 
addToSelection(JIPipeNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI
Adds an algorithm to the selection
addToSelection(JIPipeNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphEditorUI
Adds an algorithm to the selection
addToTable(ResultsTable) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Adds the table to an existing table
addUpdateSite(UpdateSite) - Method in class org.hkijena.jipipe.ui.ijupdater.JIPipeImageJPluginManager
 
addVerticalGlue() - Method in class org.hkijena.jipipe.installer.linux.ui.utils.FormPanel
Adds a component that acts as Box.verticalGlue()
addVerticalGlue(Component, MarkdownDocument) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.FormPanel
Adds a vertical glue component
addVerticalGlue() - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component that acts as Box.verticalGlue()
addVerticalGlue(Component, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a vertical glue component
addWideToForm(T, MarkdownDocument) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.FormPanel
Adds a component.
addWideToForm(T, MarkdownDocument) - Method in class org.hkijena.jipipe.ui.components.FormPanel
Adds a component.
adjustmentValueChanged(AdjustmentEvent) - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphEditorMinimap
 
AdvancedFileChooser - Class in org.hkijena.jipipe.ui.components
 
AdvancedFileChooser() - Constructor for class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
AdvancedFileChooser(File) - Constructor for class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
AdvancedFileChooser.FileChooserComponent - Class in org.hkijena.jipipe.ui.components
 
AdvancedFileChooser.FileChooserComponentUI - Class in org.hkijena.jipipe.ui.components
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedROIListDataViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
afterSetRow() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Called after the data row was changed
AlgorithmDeselectedEvent(JIPipeNodeInfoPicker, JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.ui.components.JIPipeNodeInfoPicker.AlgorithmDeselectedEvent
 
AlgorithmEvent(JIPipeNodeUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeNodeUI.AlgorithmEvent
Creates a new event
AlgorithmFinderSuccessEvent - Class in org.hkijena.jipipe.ui.grapheditor.algorithmfinder
Generated when the algorithm finder successfully found a connection
AlgorithmFinderSuccessEvent(JIPipeDataSlot, JIPipeDataSlot) - Constructor for class org.hkijena.jipipe.ui.grapheditor.algorithmfinder.AlgorithmFinderSuccessEvent
 
AlgorithmGraphCopyNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.contextmenu.clipboard
 
AlgorithmGraphCopyNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.contextmenu.clipboard.AlgorithmGraphCopyNodeUIContextAction
 
AlgorithmGraphCutNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.contextmenu.clipboard
 
AlgorithmGraphCutNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.contextmenu.clipboard.AlgorithmGraphCutNodeUIContextAction
 
AlgorithmGraphDuplicateNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.contextmenu.clipboard
 
AlgorithmGraphDuplicateNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.contextmenu.clipboard.AlgorithmGraphDuplicateNodeUIContextAction
 
AlgorithmGraphPasteNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.contextmenu.clipboard
 
AlgorithmGraphPasteNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.contextmenu.clipboard.AlgorithmGraphPasteNodeUIContextAction
 
AlgorithmSelectedEvent(JIPipeNodeUI, boolean) - Constructor for class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI.AlgorithmSelectedEvent
 
AlgorithmSelectionChangedEvent(JIPipeGraphCanvasUI) - Constructor for class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI.AlgorithmSelectionChangedEvent
 
ALL_DESCRIPTIONS - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.util.measure.ImageStatisticsSetParameter
 
AllCacheToNonVirtualRun - Class in org.hkijena.jipipe.ui.data
 
AllCacheToNonVirtualRun() - Constructor for class org.hkijena.jipipe.ui.data.AllCacheToNonVirtualRun
 
AllCacheToVirtualRun - Class in org.hkijena.jipipe.ui.data
 
AllCacheToVirtualRun() - Constructor for class org.hkijena.jipipe.ui.data.AllCacheToVirtualRun
 
ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.MacroWrapperAlgorithm
 
ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.extensions.python.PythonUtils
 
ALLOWED_PARAMETER_CLASSES - Static variable in class org.hkijena.jipipe.extensions.r.RUtils
 
ALLOWED_PARAMETER_TYPES - Static variable in class org.hkijena.jipipe.extensions.clij2.CLIJExtension
 
allowOutputSlotInheritance(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
Enables/disables if slot inheritance is allowed
allowsInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
allowsInputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
allowsOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
allowsOutputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
AlwaysOnTopToggle - Class in org.hkijena.jipipe.ui.components
 
AlwaysOnTopToggle(JWindow) - Constructor for class org.hkijena.jipipe.ui.components.AlwaysOnTopToggle
 
AlwaysOnTopToggle(JFrame) - Constructor for class org.hkijena.jipipe.ui.components.AlwaysOnTopToggle
 
AlwaysOnTopToggle(JDialog) - Constructor for class org.hkijena.jipipe.ui.components.AlwaysOnTopToggle
 
Anchor - Enum in org.hkijena.jipipe.extensions.parameters.roi
An anchor
AnchorParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.roi
Editor for Margin
AnchorParameterEditorUI(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.roi.AnchorParameterEditorUI
 
AnimatedIcon - Class in org.hkijena.jipipe.ui.components
 
AnimatedIcon(Component, ImageIcon, ImageIcon, int, double) - Constructor for class org.hkijena.jipipe.ui.components.AnimatedIcon
 
AnimationSpeedPlugin - Class in org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins
 
AnimationSpeedPlugin(ImageViewerPanel) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.AnimationSpeedPlugin
 
AnnotateByExpression - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that annotates all data with the same annotation
AnnotateByExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
 
AnnotateByExpression(AnnotateByExpression) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateByExpression
Copies the algorithm
AnnotateByExpression.VariableSource - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
AnnotateByImageStatisticsExpressionAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze
Wrapper around RoiManager
AnnotateByImageStatisticsExpressionAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze.AnnotateByImageStatisticsExpressionAlgorithm
Instantiates a new node type.
AnnotateByImageStatisticsExpressionAlgorithm(AnnotateByImageStatisticsExpressionAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.analyze.AnnotateByImageStatisticsExpressionAlgorithm
Instantiates a new node type.
AnnotateByTablePropertiesAlgorithm - Class in org.hkijena.jipipe.extensions.tables.algorithms
 
AnnotateByTablePropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.AnnotateByTablePropertiesAlgorithm
 
AnnotateByTablePropertiesAlgorithm(AnnotateByTablePropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.AnnotateByTablePropertiesAlgorithm
 
AnnotateWithAnnotationTable - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Algorithm that merges the annotations of all inputs and outputs the data with the shared annotations
AnnotateWithAnnotationTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
Creates a new instance
AnnotateWithAnnotationTable(AnnotateWithAnnotationTable) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
Creates a copy
AnnotateWithData - Class in org.hkijena.jipipe.extensions.annotation.algorithms
 
AnnotateWithData(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
AnnotateWithData(AnnotateWithData) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithData
 
AnnotateWithDataString - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
AnnotateWithDataString(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
New instance
AnnotateWithDataString(AnnotateWithDataString) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithDataString
Copies the algorithm
AnnotateWithSourceSlot - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Generates annotations from filenames
AnnotateWithSourceSlot(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
New instance
AnnotateWithSourceSlot(AnnotateWithSourceSlot) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithSourceSlot
Copies the algorithm
AnnotationGeneratorExpression - Class in org.hkijena.jipipe.extensions.expressions
An expression that is used to generate annotations for data
AnnotationGeneratorExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpression
 
AnnotationGeneratorExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpression
 
AnnotationGeneratorExpression(ExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpression
 
AnnotationGeneratorExpressionVariableSource - Class in org.hkijena.jipipe.extensions.expressions
 
AnnotationGeneratorExpressionVariableSource() - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationGeneratorExpressionVariableSource
 
annotationListToMap(Collection<JIPipeAnnotation>, JIPipeAnnotationMergeStrategy) - Static method in class org.hkijena.jipipe.api.data.JIPipeAnnotation
Converts a set of annotations to a map
annotationListToPython(Collection<JIPipeAnnotation>) - Static method in class org.hkijena.jipipe.api.data.JIPipeAnnotation
Converts a list of annotations into a Python dictionary
annotationMapToPython(Map<String, JIPipeAnnotation>) - Static method in class org.hkijena.jipipe.api.data.JIPipeAnnotation
Converts a map of annotations into a Python dictionary
AnnotationQueryExpression - Class in org.hkijena.jipipe.extensions.expressions
An expression that is used to query annotations
AnnotationQueryExpression() - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpression
 
AnnotationQueryExpression(String) - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpression
 
AnnotationQueryExpression(ExpressionParameter) - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpression
 
AnnotationQueryExpressionVariableSource - Class in org.hkijena.jipipe.extensions.expressions
 
AnnotationQueryExpressionVariableSource() - Constructor for class org.hkijena.jipipe.extensions.expressions.AnnotationQueryExpressionVariableSource
 
AnnotationsExtension - Class in org.hkijena.jipipe.extensions.annotation
Extension that provides data types and algorithms to modify data annotations
AnnotationsExtension() - Constructor for class org.hkijena.jipipe.extensions.annotation.AnnotationsExtension
 
AnnotationsNodeTypeCategory - Class in org.hkijena.jipipe.api.nodes.categories
 
AnnotationsNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
AnnotationsToParametersAlgorithm - Class in org.hkijena.jipipe.extensions.multiparameters.algorithms
 
AnnotationsToParametersAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.algorithms.AnnotationsToParametersAlgorithm
 
AnnotationsToParametersAlgorithm(AnnotationsToParametersAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.multiparameters.algorithms.AnnotationsToParametersAlgorithm
 
annotationsToPython(StringBuilder, Collection<JIPipeAnnotation>) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
Converts annotations into Python code.
annotationsToR(StringBuilder, Collection<JIPipeAnnotation>) - Static method in class org.hkijena.jipipe.extensions.r.RUtils
Converts annotations into R code.
AnnotationTableData - Class in org.hkijena.jipipe.extensions.tables.datatypes
A special kind of ResultsTableData that stores annotation columns.
AnnotationTableData() - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
AnnotationTableData(Map<String, TableColumn>) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
AnnotationTableData(Collection<TableColumn>) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
AnnotationTableData(ResultsTable) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
AnnotationTableData(ResultsTableData) - Constructor for class org.hkijena.jipipe.extensions.tables.datatypes.AnnotationTableData
AnnotationTableFromFile - Class in org.hkijena.jipipe.extensions.annotation.datasources
Imports AnnotationTableData from a file
AnnotationTableFromFile(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.datasources.AnnotationTableFromFile
 
AnnotationTableFromFile(AnnotationTableFromFile) - Constructor for class org.hkijena.jipipe.extensions.annotation.datasources.AnnotationTableFromFile
Copies the algorithm
AnnotationTableToPaths - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Filters input files
AnnotationTableToPaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationTableToPaths
Instantiates the algorithm
AnnotationTableToPaths(AnnotationTableToPaths) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationTableToPaths
Copies the algorithm
AnnotationToPath - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Filters input files
AnnotationToPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationToPath
Instantiates the algorithm
AnnotationToPath(AnnotationToPath) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.AnnotationToPath
Copies the algorithm
annotationType() - Method in class org.hkijena.jipipe.api.JIPipeDefaultDocumentation
 
annotationType() - Method in class org.hkijena.jipipe.api.nodes.DefaultJIPipeInputSlot
 
annotationType() - Method in class org.hkijena.jipipe.api.nodes.DefaultJIPipeOutputSlot
 
AnyClassFilter - Class in org.hkijena.jipipe.utils.classfilters
 
AnyClassFilter() - Constructor for class org.hkijena.jipipe.utils.classfilters.AnyClassFilter
 
AppendRectangularRoiAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi
Wrapper around RoiManager
AppendRectangularRoiAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.AppendRectangularRoiAlgorithm
Instantiates a new node type.
AppendRectangularRoiAlgorithm(AppendRectangularRoiAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.AppendRectangularRoiAlgorithm
Instantiates a new node type.
apply(Object) - Method in class org.hkijena.jipipe.extensions.expressions.ExpressionBuilderUI.EntryToStringFunction
 
apply(double) - Method in class org.hkijena.jipipe.extensions.expressions.NumericFunctionExpression
 
apply(double) - Method in enum org.hkijena.jipipe.extensions.parameters.colors.ColorMap
Generates a color according to the color map
apply(String) - Method in class org.hkijena.jipipe.extensions.parameters.patterns.StringPatternExtraction
 
apply(Rectangle) - Method in class org.hkijena.jipipe.extensions.parameters.roi.Margin
Generates the rectangle defined by the definition.
apply(Collection<Boolean>) - Method in enum org.hkijena.jipipe.extensions.parameters.util.LogicalOperation
Apply the logical operation for the items
apply(TableColumn) - Method in interface org.hkijena.jipipe.extensions.tables.ColumnOperation
Applies the operation
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.AbsoluteColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusCosineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusSineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusTangentColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.CeilingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ClampNegativeColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ClampPositiveColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.CosineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.DegreeToRadiansColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ExpColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.FactorizeColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.FloorColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicCosineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicSineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.HyperbolicTangentColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.LnColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.Log10ColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.OccurrencesColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.RadiansToDegreeColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.RemoveNaNColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.RoundColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SignColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SineColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SortAscendingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SortDescendingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SqrtColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.SquareColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.TangentColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ToNumericColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.converting.ToStringColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.GetFirstIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.GetLastIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.MergeToJsonIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsAverageIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCountIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCountNonZeroIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsCumulativeSumColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsGeometricMeanIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsKurtosisIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMaxIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMedianIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsMinIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsSkewnessIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsStandardDeviationIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsVarianceIntegratingColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.StatisticsWeightedSumColumnOperation
 
apply(TableColumn) - Method in class org.hkijena.jipipe.extensions.tables.operations.integrating.SumIntegratingColumnOperation
 
applyCalibration(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.ImageViewerPanelDisplayRangeControl
 
applyCalibration(boolean) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.ImageViewerPanelDisplayRangeControl
 
applyCalibrationTo(ImagePlus) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.CalibrationPlugin
 
ApplyColorMathExpression2DExpression - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
 
ApplyColorMathExpression2DExpression(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyColorMathExpression2DExpression
 
ApplyColorMathExpression2DExpression(ApplyColorMathExpression2DExpression) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyColorMathExpression2DExpression
 
ApplyDistanceTransform2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap
Wrapper around EDM
ApplyDistanceTransform2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap.ApplyDistanceTransform2DAlgorithm
Instantiates a new node type.
ApplyDistanceTransform2DAlgorithm(ApplyDistanceTransform2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap.ApplyDistanceTransform2DAlgorithm
Instantiates a new node type.
ApplyExpressionPerRowAlgorithm - Class in org.hkijena.jipipe.extensions.tables.algorithms
 
ApplyExpressionPerRowAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ApplyExpressionPerRowAlgorithm
 
ApplyExpressionPerRowAlgorithm(ApplyExpressionPerRowAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ApplyExpressionPerRowAlgorithm
 
ApplyExpressionPerRowAlgorithm.VariableSource - Class in org.hkijena.jipipe.extensions.tables.algorithms
 
applyInheritanceConversion(JIPipeDataSlotInfo, Class<? extends JIPipeData>) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Applies inheritance conversion.
applyLUT(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.lut.LUTInverterAlgorithm
 
applyLUT() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.ImageViewerLUTEditor
 
ApplyMath2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
Wrapper around ImageProcessor
ApplyMath2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyMath2DAlgorithm
Instantiates a new node type.
ApplyMath2DAlgorithm(ApplyMath2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyMath2DAlgorithm
Instantiates a new node type.
ApplyMath2DAlgorithm.Transformation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
Available transformation functions
ApplyMathExpression2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
Wrapper around ImageProcessor
ApplyMathExpression2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyMathExpression2DAlgorithm
Instantiates a new node type.
ApplyMathExpression2DAlgorithm(ApplyMathExpression2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyMathExpression2DAlgorithm
Instantiates a new node type.
applyOperation(List<ResultsTableData.Index>, ConvertingColumnOperation) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Applies an operation to the selected cells
ApplyRun - Class in org.hkijena.jipipe.ui.ijupdater
 
ApplyRun(FilesCollection) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ApplyRun
 
applyThemeToCodeEditor(RSyntaxTextArea) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
ApplyTransform2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
Wrapper around ImageProcessor
ApplyTransform2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyTransform2DAlgorithm
Instantiates a new node type.
ApplyTransform2DAlgorithm(ApplyTransform2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyTransform2DAlgorithm
Instantiates a new node type.
ApplyTransform2DAlgorithm.Transformation - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
Available transformation functions
applyUpdates(FilesCollection) - Static method in class org.hkijena.ijupdatercli.Main
 
ApplyVectorMathExpression2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math
Wrapper around ImageProcessor
ApplyVectorMathExpression2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyVectorMathExpression2DAlgorithm
Instantiates a new node type.
ApplyVectorMathExpression2DAlgorithm(ApplyVectorMathExpression2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.ApplyVectorMathExpression2DAlgorithm
Instantiates a new node type.
applyVirtualState(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
If virtual, put all data into the virtual storage If not, fetch all virtual data from storage This function reacts to the virtual mode setting in VirtualDataSettings and will refuse to make data virtual
ArcusCosineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
ArcusCosineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusCosineColumnOperation
 
ArcusSineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
ArcusSineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusSineColumnOperation
 
ArcusTangentColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
ArcusTangentColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ArcusTangentColumnOperation
 
ArrangeChannelsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color
Wrapper around ChannelArranger
ArrangeChannelsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color.ArrangeChannelsAlgorithm
Instantiates a new node type.
ArrangeChannelsAlgorithm(ArrangeChannelsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color.ArrangeChannelsAlgorithm
Creates a copy
ArrowLessScrollBarUI - Class in org.hkijena.jipipe.installer.linux.ui.utils
 
ArrowLessScrollBarUI() - Constructor for class org.hkijena.jipipe.installer.linux.ui.utils.ArrowLessScrollBarUI
 
ArrowLessScrollBarUI - Class in org.hkijena.jipipe.ui.theme
 
ArrowLessScrollBarUI() - Constructor for class org.hkijena.jipipe.ui.theme.ArrowLessScrollBarUI
 
askOpenInCurrentWindow(Component, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Asks the user how to open a project: In the current window or a new window
AssembleExtractedROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi
 
AssembleExtractedROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.AssembleExtractedROIAlgorithm
 
AssembleExtractedROIAlgorithm(AssembleExtractedROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.AssembleExtractedROIAlgorithm
 
assert2DImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
assert3DImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
assert4DImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
assert5DImage(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
 
AsserterWrapperImageSource - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
AsserterWrapperImageSource(ImageSource, Consumer<ImagePlus>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.AsserterWrapperImageSource
 
assignButtonMenu - Variable in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeDataSlotUI
 
assignData(String, TableColumn) - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
Assigns data to a column
assignDataStoragePaths() - Method in class org.hkijena.jipipe.api.JIPipeRun
Iterates through output slots and assigns the data storage paths
attach(Class<?>, Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Attaches an object as the specified type Warning: Attachments are not serialized
attach(Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Attaches the object with its class as key.
attachAdditionalMetadata(String, Object) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Attaches additional metadata (persistent)
AUTO_THRESHOLDER - Static variable in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdFunction
 
autoClean(boolean, boolean, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.JIPipeProjectCache
Safely removes cache entries that are not accessible anymore (e.g. an algorithm was removed from the graph; or states where the slots do not exist anymore)
autoCreate() - Method in class org.hkijena.jipipe.api.nodes.DefaultJIPipeInputSlot
 
autoCreate() - Method in class org.hkijena.jipipe.api.nodes.DefaultJIPipeOutputSlot
 
autoCreateSlots() - Method in class org.hkijena.jipipe.api.grouping.NodeGroup
Automatically creates slots that connect all inputs
autoExpandLeftTop() - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI
 
autoLayout() - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI
Applies a full auto-layout method
autoLayoutAll() - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI
Auto-layouts all UIs
autoPlaceCloseToCursor(JIPipeNodeUI) - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI
 
autoPlaceCloseToLocation(JIPipeNodeUI, Point) - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI
Moves the node close to a real location
autoSave(JIPipeProjectWindow) - Method in class org.hkijena.jipipe.extensions.settings.AutoSaveSettings
 
autoSaveAll() - Method in class org.hkijena.jipipe.extensions.settings.AutoSaveSettings
 
AutoSaveSettings - Class in org.hkijena.jipipe.extensions.settings
 
AutoSaveSettings() - Constructor for class org.hkijena.jipipe.extensions.settings.AutoSaveSettings
 
autoSizeColumns() - Method in class org.hkijena.jipipe.ui.tableeditor.TableEditor
Auto-sizes all columns
AutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold
Thresholding node that thresholds via an auto threshold
AutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.AutoThreshold2DAlgorithm
 
AutoThreshold2DAlgorithm(AutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.AutoThreshold2DAlgorithm
Copies the algorithm
AutoThreshold2DAlgorithm.SliceThresholdMode - Enum in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold
 
AVICompression - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
Wrapper around AVI_Writer compression

B

b0 - Variable in class org.hkijena.jipipe.ui.grapheditor.connections.RectangularLine
 
b1 - Variable in class org.hkijena.jipipe.ui.grapheditor.connections.RectangularLine
 
BackgroundPanel - Class in org.hkijena.jipipe.ui.components
 
BackgroundPanel(BufferedImage, boolean) - Constructor for class org.hkijena.jipipe.ui.components.BackgroundPanel
 
BarBoxAndWhiskerCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
A box and whisker plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: Yes
BarBoxAndWhiskerCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarBoxAndWhiskerCategoryPlotData
Creates a new instance
BarBoxAndWhiskerCategoryPlotData(BarBoxAndWhiskerCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarBoxAndWhiskerCategoryPlotData
Creates a copy
BarCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
A bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No
BarCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarCategoryPlotData
Creates a new instance
BarCategoryPlotData(BarCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarCategoryPlotData
Creates a copy
BarStatisticalCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
A statistical bar category plot Series table columns: Value (Double), Category (String), Group (String) Multiple series: No
BarStatisticalCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarStatisticalCategoryPlotData
Creates a new instance
BarStatisticalCategoryPlotData(BarStatisticalCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BarStatisticalCategoryPlotData
Creates a copy
BasicMinicondaEnvPythonInstaller - Class in org.hkijena.jipipe.extensions.python.installers
 
BasicMinicondaEnvPythonInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
 
BasicMinicondaEnvPythonInstaller.Configuration - Class in org.hkijena.jipipe.extensions.python.installers
 
beforeDraw(int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.CalibrationPlugin
 
beforeDraw(int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.ImageViewerPanelPlugin
Called before draw is called
beforeDraw(int, int, int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.LUTManagerPlugin
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedROIListDataViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
beforeSetRow() - Method in class org.hkijena.jipipe.ui.cache.JIPipeCacheDataViewerWindow
Called before the data row is changed
beginModificationBlock() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Halts all ParameterStructureChangedEvent until endModificationBlock() is called.
Bernsen(ImagePlus, int, double, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
BernsenLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local
Segmenter node that thresholds via an auto threshold Based on code from Auto_Local_Threshold
BernsenLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
 
BernsenLocalAutoThreshold2DAlgorithm(BernsenLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local.BernsenLocalAutoThreshold2DAlgorithm
Copies the algorithm
BinarizeAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
 
BinarizeAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.BinarizeAlgorithm
Instantiates a new node type.
BinarizeAlgorithm(BinarizeAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.BinarizeAlgorithm
Instantiates a new node type.
BioFormatsConfigTool - Class in org.hkijena.jipipe.extensions.imagejdatatypes.tools
 
BioFormatsConfigTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.tools.BioFormatsConfigTool
Creates a new instance
BioFormatsExporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms
 
BioFormatsExporter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
 
BioFormatsExporter(BioFormatsExporter) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.BioFormatsExporter
 
BioFormatsImporter - Class in org.hkijena.jipipe.extensions.imagejdatatypes.datasources
BioFormats importer wrapper
BioFormatsImporter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datasources.BioFormatsImporter
 
BioFormatsImporter(BioFormatsImporter) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.datasources.BioFormatsImporter
Copies the algorithm
BitDepth - Enum in org.hkijena.jipipe.extensions.imagejdatatypes.util
Enum of ImageJ bit depths
BitDepthEnumItemInfo - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
BitDepthEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.BitDepthEnumItemInfo
 
BitwiseLogicalOperationAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
 
BitwiseLogicalOperationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.BitwiseLogicalOperationAlgorithm
 
BitwiseLogicalOperationAlgorithm(BitwiseLogicalOperationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.BitwiseLogicalOperationAlgorithm
 
BLACK_TRANSPARENT - Static variable in class org.hkijena.jipipe.utils.ColorUtils
 
BlackToWhiteTrackBackground - Class in org.hkijena.jipipe.extensions.imagejalgorithms.utils
 
BlackToWhiteTrackBackground() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.utils.BlackToWhiteTrackBackground
 
bold - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
BooleanComboBoxItemRenderer(String, String) - Constructor for class org.hkijena.jipipe.extensions.parameters.primitives.BooleanParameterEditorUI.BooleanComboBoxItemRenderer
 
BooleanFalseConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
BooleanFalseConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.BooleanFalseConstant
 
BooleanFormData - Class in org.hkijena.jipipe.extensions.forms.datatypes
 
BooleanFormData() - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
BooleanFormData(BooleanFormData) - Constructor for class org.hkijena.jipipe.extensions.forms.datatypes.BooleanFormData
 
BooleanFormGeneratorAlgorithm - Class in org.hkijena.jipipe.extensions.forms.algorithms
 
BooleanFormGeneratorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.BooleanFormGeneratorAlgorithm
 
BooleanFormGeneratorAlgorithm(BooleanFormGeneratorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.forms.algorithms.BooleanFormGeneratorAlgorithm
 
BooleanParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.primitives
Parameter editor for boolean data
BooleanParameterEditorUI(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.primitives.BooleanParameterEditorUI
 
BooleanParameterEditorUI.BooleanComboBoxItemRenderer - Class in org.hkijena.jipipe.extensions.parameters.primitives
 
BooleanParameterSettings - Annotation Type in org.hkijena.jipipe.extensions.parameters.primitives
 
BooleanParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.primitives
Info for Boolean
BooleanParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.primitives.BooleanParameterTypeInfo
 
BooleanPrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.primitives
Info for Boolean
BooleanPrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.primitives.BooleanPrimitiveParameterTypeInfo
 
BooleanTrueConstant - Class in org.hkijena.jipipe.extensions.expressions.constants
 
BooleanTrueConstant() - Constructor for class org.hkijena.jipipe.extensions.expressions.constants.BooleanTrueConstant
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
BORDER_COLOR - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.AnnotationsNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.DataSourceNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ExportNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.FileSystemNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.ImagesNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.MiscellaneousNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.RoiNodeTypeCategory
 
BORDER_COLOR_DARK - Static variable in class org.hkijena.jipipe.api.nodes.categories.TableNodeTypeCategory
 
BoxAndWhiskerCategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains data for box and whisker category plots category plots.
BoxAndWhiskerCategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BoxAndWhiskerCategoryPlotData
Creates a new instance
BoxAndWhiskerCategoryPlotData(BoxAndWhiskerCategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.BoxAndWhiskerCategoryPlotData
Creates a copy
BoxFilter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur
Wrapper around ImageProcessor
BoxFilter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur.BoxFilter2DAlgorithm
Instantiates a new node type.
BoxFilter2DAlgorithm(BoxFilter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur.BoxFilter2DAlgorithm
Instantiates a new node type.
BoxFilter3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur
Wrapper around GaussianBlur
BoxFilter3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur.BoxFilter3DAlgorithm
Instantiates a new node type.
BoxFilter3DAlgorithm(BoxFilter3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.blur.BoxFilter3DAlgorithm
Instantiates a new node type.
BrightSpotsSegmentation2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold
Applies Bright spots segmentation
BrightSpotsSegmentation2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.BrightSpotsSegmentation2DAlgorithm
 
BrightSpotsSegmentation2DAlgorithm(BrightSpotsSegmentation2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.BrightSpotsSegmentation2DAlgorithm
Copies the algorithm
build() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration.Builder
 
build(JIPipeProgressInfo) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatchBuilder
 
build() - Method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
Returns the finished object Requires following properties to be set: source, field class, getter, setter
build() - Method in class org.hkijena.jipipe.ui.parameters.AdaptiveParameterBuilder
 
builder() - Static method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
builder() - Static method in class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess
Creates a new builder
Builder() - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeManualParameterAccess.Builder
 
buildFor(Path, ExpressionVariables) - Static method in class org.hkijena.jipipe.extensions.expressions.variables.PathFilterExpressionParameterVariableSource
 
buildSeries() - Method in class org.hkijena.jipipe.ui.plotbuilder.JIPipePlotSeriesBuilder
Generates a series
buildVariablesSet(ImagePlus, ExpressionVariables) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.parameters.ImageQueryExpressionVariableSource
Builds the proper variable set for an image
BusyCursor - Class in org.hkijena.jipipe.utils.ui
A cursor for a component to indicate that some process is running
BusyCursor(Component) - Constructor for class org.hkijena.jipipe.utils.ui.BusyCursor
 
ByteParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.primitives
Info for Byte
ByteParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.primitives.ByteParameterTypeInfo
 
BytePrimitiveParameterTypeInfo - Class in org.hkijena.jipipe.extensions.parameters.primitives
Info for Byte
BytePrimitiveParameterTypeInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.primitives.BytePrimitiveParameterTypeInfo
 
ByteRangeParameterGenerator - Class in org.hkijena.jipipe.extensions.parameters.generators
Generates Byte
ByteRangeParameterGenerator(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.parameters.generators.ByteRangeParameterGenerator
Creates a new instance

C

CacheAwareOpenResultsTableInJIPipeDataOperation - Class in org.hkijena.jipipe.extensions.tables.display
 
CacheAwareOpenResultsTableInJIPipeDataOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.display.CacheAwareOpenResultsTableInJIPipeDataOperation
 
CachedImagePlusDataViewerWindow - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
CachedImagePlusDataViewerWindow(JIPipeWorkbench, JIPipeCacheSlotDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedImagePlusDataViewerWindow
 
CachedPlotViewerWindow - Class in org.hkijena.jipipe.extensions.plots
 
CachedPlotViewerWindow(JIPipeWorkbench, JIPipeCacheSlotDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.plots.CachedPlotViewerWindow
 
CachedROIListDataViewerWindow - Class in org.hkijena.jipipe.extensions.imagejdatatypes.display
 
CachedROIListDataViewerWindow(JIPipeWorkbench, JIPipeCacheSlotDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.display.CachedROIListDataViewerWindow
 
CachedTableViewerWindow - Class in org.hkijena.jipipe.extensions.tables.display
 
CachedTableViewerWindow(JIPipeWorkbench, JIPipeCacheSlotDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.tables.display.CachedTableViewerWindow
 
CachedTextViewerWindow - Class in org.hkijena.jipipe.extensions.strings
Cached viewer for
CachedTextViewerWindow(JIPipeWorkbench, JIPipeCacheSlotDataSource, String, boolean) - Constructor for class org.hkijena.jipipe.extensions.strings.CachedTextViewerWindow
 
CacheToNonVirtualRun - Class in org.hkijena.jipipe.ui.data
 
CacheToNonVirtualRun(JIPipeProject) - Constructor for class org.hkijena.jipipe.ui.data.CacheToNonVirtualRun
 
CacheToVirtualRun - Class in org.hkijena.jipipe.ui.data
 
CacheToVirtualRun(JIPipeProject) - Constructor for class org.hkijena.jipipe.ui.data.CacheToVirtualRun
 
calculateGridSize() - Method in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeDataSlotUI
Calculates the size in grid coordinates
calculateGridSize() - Method in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeHorizontalDataSlotUI
 
calculateGridSize() - Method in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeHorizontalNodeUI
 
calculateGridSize() - Method in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeNodeUI
Calculates the size in grid coordinates
calculateGridSize() - Method in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeVerticalDataSlotUI
 
calculateGridSize() - Method in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeVerticalNodeUI
 
calculateMaxTabHeight(int) - Method in class org.hkijena.jipipe.ui.theme.CustomTabbedPaneUI
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdFunction
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdHuang
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdImageJDefault
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdImageJIsoData
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdIntermodes
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdIsoData
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdLi
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdMaxEntropy
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdMean
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdMinError
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdMinimum
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdMoments
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdOtsu
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdPercentile
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdRenyi
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdShanbhag
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdTriangle
 
calculateThreshold(int[]) - Method in class org.hkijena.jipipe.extensions.expressions.functions.HistogramThresholdYen
 
calibrate(ImagePlus, ImageJCalibrationMode, double, double) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Calibrates the image.
CalibrationPlugin - Class in org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins
 
CalibrationPlugin(ImageViewerPanel) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.CalibrationPlugin
 
canAddInputSlot() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
canAddInputSlot() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canAddOrDeleteNodes(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
canAddOutputSlot() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
canAddOutputSlot() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canAutoPassThrough() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Returns true if the algorithm can automatically apply pass-through This is only possible if there is at most one input and at most one output.
cancel() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
cancel(JIPipeRunnable) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.JIPipeRunnerQueue
Cancels a runnable
cancel - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
cancel(JIPipeRunnable) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunnerQueue
Cancels a runnable
cancel(boolean) - Method in class org.hkijena.jipipe.utils.InstantFuture
 
CancelledEvent(ProcessUtils.RunCancellationWatchdog) - Constructor for class org.hkijena.jipipe.utils.ProcessUtils.RunCancellationWatchdog.CancelledEvent
 
canConnect(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Slow implementation of connection checking that tests for graph cycles
canConnectFast(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Fast implementation of connection checking without copying the graph
canConvertImageJToJIPipe(Object) - Method in interface org.hkijena.jipipe.api.compat.ImageJDatatypeAdapter
Returns true if this adapter can convert to the specified JIPipe data type
canConvertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageDataImageJAdapter
 
canConvertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataImageJAdapter
 
canConvertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImgPlusDataImageJAdapter
 
canConvertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageDataImageJAdapter
 
canConvertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ResultsTableDataImageJAdapter
 
canConvertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ROIDataImageJAdapter
 
canConvertJIPipeToImageJ(JIPipeData) - Method in interface org.hkijena.jipipe.api.compat.ImageJDatatypeAdapter
Returns true if this adapter can convert to the specified ImageJ data type
canConvertJIPipeToImageJ(JIPipeData) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageDataImageJAdapter
 
canConvertJIPipeToImageJ(JIPipeData) - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataImageJAdapter
 
canConvertJIPipeToImageJ(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImgPlusDataImageJAdapter
 
canConvertJIPipeToImageJ(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageDataImageJAdapter
 
canConvertJIPipeToImageJ(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ResultsTableDataImageJAdapter
 
canConvertJIPipeToImageJ(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ROIDataImageJAdapter
 
canCreateCompatibleInputSlot(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Returns if an input slot with specified type can be created
canCreateCompatibleInputSlot(Class<? extends JIPipeData>) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canCreateCompatibleOutputSlot(Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Returns if an output slot with specified type can be created
canCreateCompatibleOutputSlot(Class<? extends JIPipeData>) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canExtract() - Method in class org.hkijena.jipipe.api.nodes.categories.InternalNodeTypeCategory
 
canExtract() - Method in interface org.hkijena.jipipe.api.nodes.JIPipeNodeTypeCategory
Returns if the node can be extracted (copied) from the graph
canModifyInputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
canModifyInputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canModifyOutputSlots() - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
 
canModifyOutputSlots() - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canModifySlots(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.ui.JIPipeProjectWorkbench
 
CannyEdgeDetectorAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.edge
This is the JIPipe version of the ImageJ plugin https://imagej.nih.gov/ij/plugins/canny/Canny_Edge_Detector.java This is a plugin version of Tom Gibara's implementation of the Canny edge detection algorithm in Java, available at: http://www.tomgibara.com/computer-vision/canny-edge-detector This software has been released into the public domain.
CannyEdgeDetectorAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.edge.CannyEdgeDetectorAlgorithm
Instantiates a new node type.
CannyEdgeDetectorAlgorithm(CannyEdgeDetectorAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.edge.CannyEdgeDetectorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.api.nodes.JIPipeAlgorithm
Returns true if the algorithm can apply pass-through.
canPassThrough() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.AnnotateWithAnnotationTable
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.MergeAnnotations
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.datatables.algorithms.ExtractTableAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ExportDataByParameter
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.FormGeneratorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.IteratingFormProcessorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.MergingFormProcessorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.forms.algorithms.SimpleIteratingFormProcessorAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.forms.DrawMaskAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.CountROIAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.RoiToRGBAlgorithm
 
canPassThrough() - Method in class org.hkijena.jipipe.extensions.multiparameters.datasources.ExtractParametersAlgorithm
 
canRegister() - Method in class org.hkijena.jipipe.api.registries.JIPipeDefaultNodeRegistrationTask
 
canRegister() - Method in interface org.hkijena.jipipe.api.registries.JIPipeNodeRegistrationTask
Returns true if the registration can be done This function should fail as fast as possible
canRegister() - Method in class org.hkijena.jipipe.extensions.jsonextensionloader.JsonExtensionRegistrationTask
 
canRemoveInputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canRemoveOutputSlot(String, boolean) - Method in interface org.hkijena.jipipe.api.data.JIPipeMutableSlotConfiguration
 
canShow(JIPipeDataSlot, JIPipeExportedDataTableRow, Path) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataImportOperation
Checks if the import is possible
canShow(JIPipeDataSlot, JIPipeExportedDataTableRow, Path) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.resultanalysis.ImportImageJPathDataOperation
 
canShowNotification(JIPipeRunWorker) - Method in class org.hkijena.jipipe.ui.running.JIPipeRunQueueNotifier
 
canUserDelete(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if the user can delete the algorithm
canUserDelete() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Returns true if a user can delete this algorithm
canUserDisconnect(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if the user can disconnect the slots
CanvasEqualizer - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform
 
CanvasEqualizer() - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform.CanvasEqualizer
 
CanvasEqualizer(CanvasEqualizer) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.transform.CanvasEqualizer
 
CaseFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
CaseFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.CaseFunction
 
CategoryPlotData - Class in org.hkijena.jipipe.extensions.plots.datatypes
Contains data for category plots.
CategoryPlotData() - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
Creates a new instance
CategoryPlotData(CategoryPlotData) - Constructor for class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
Creates a copy
CeilingColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a floor function
CeilingColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.CeilingColumnOperation
 
CellPoseAlgorithm - Class in org.hkijena.jipipe.extensions.cellpose.algorithms
 
CellPoseAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.CellPoseAlgorithm
 
CellPoseAlgorithm(CellPoseAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.CellPoseAlgorithm
 
CellPoseEnvInstaller - Class in org.hkijena.jipipe.extensions.cellpose
 
CellPoseEnvInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.cellpose.CellPoseEnvInstaller
 
CellPoseEnvInstaller.Configuration - Class in org.hkijena.jipipe.extensions.cellpose
 
CellPoseExtension - Class in org.hkijena.jipipe.extensions.cellpose
 
CellPoseExtension() - Constructor for class org.hkijena.jipipe.extensions.cellpose.CellPoseExtension
 
CellPoseGPUEnvInstaller - Class in org.hkijena.jipipe.extensions.cellpose
 
CellPoseGPUEnvInstaller(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.cellpose.CellPoseGPUEnvInstaller
 
CellPoseGPUEnvInstaller.Configuration - Class in org.hkijena.jipipe.extensions.cellpose
 
CellPoseModel - Enum in org.hkijena.jipipe.extensions.cellpose
 
CellPoseModelData - Class in org.hkijena.jipipe.extensions.cellpose.datatypes
Wrapper around Cellpose models
CellPoseModelData(Path) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellPoseModelData
 
CellPoseModelData(byte[], String) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellPoseModelData
 
CellPoseModelData(CellPoseModelData) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellPoseModelData
 
CellPosePretrainedModel - Enum in org.hkijena.jipipe.extensions.cellpose
 
cellPoseROIJsonToImageJ(Path) - Static method in class org.hkijena.jipipe.extensions.cellpose.CellPoseUtils
Converts ROI in a custom Json format to ROIListData
cellPoseROIToImageJ(Path) - Static method in class org.hkijena.jipipe.extensions.cellpose.CellPoseUtils
Converts a Cellpose ROI to ROIListData according to https://github.com/MouseLand/cellpose/blob/master/imagej_roi_converter.py
CellPoseSettings - Class in org.hkijena.jipipe.extensions.cellpose
 
CellPoseSettings() - Constructor for class org.hkijena.jipipe.extensions.cellpose.CellPoseSettings
 
CellPoseSizeModelData - Class in org.hkijena.jipipe.extensions.cellpose.datatypes
Wrapper around Cellpose models
CellPoseSizeModelData(Path) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellPoseSizeModelData
 
CellPoseSizeModelData(byte[], String) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellPoseSizeModelData
 
CellPoseSizeModelData(CellPoseSizeModelData) - Constructor for class org.hkijena.jipipe.extensions.cellpose.datatypes.CellPoseSizeModelData
 
CellPoseTrainingAlgorithm - Class in org.hkijena.jipipe.extensions.cellpose.algorithms
 
CellPoseTrainingAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.CellPoseTrainingAlgorithm
 
CellPoseTrainingAlgorithm(CellPoseTrainingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.cellpose.algorithms.CellPoseTrainingAlgorithm
 
CellPoseUtils - Class in org.hkijena.jipipe.extensions.cellpose
 
center - Variable in class org.hkijena.jipipe.utils.PointRange
 
centerImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.ImageViewerPanelCanvas
 
ChamferDistanceMap2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap
 
ChamferDistanceMap2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap.ChamferDistanceMap2DAlgorithm
Instantiates a new node type.
ChamferDistanceMap2DAlgorithm(ChamferDistanceMap2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap.ChamferDistanceMap2DAlgorithm
Instantiates a new node type.
ChamferDistanceMap3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap
 
ChamferDistanceMap3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap.ChamferDistanceMap3DAlgorithm
Instantiates a new node type.
ChamferDistanceMap3DAlgorithm(ChamferDistanceMap3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.math.distancemap.ChamferDistanceMap3DAlgorithm
Instantiates a new node type.
changed(DocumentEvent) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.DocumentChangeListener
All-in-one event for insertion, removal, change
changed(DocumentEvent) - Method in class org.hkijena.jipipe.ui.components.DocumentChangeListener
All-in-one event for insertion, removal, change
changedUpdate(DocumentEvent) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.DocumentChangeListener
 
changedUpdate(DocumentEvent) - Method in class org.hkijena.jipipe.ui.components.DocumentChangeListener
 
ChangeRoiPropertiesAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi
Wrapper around RoiManager
ChangeRoiPropertiesAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.ChangeRoiPropertiesAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesAlgorithm(ChangeRoiPropertiesAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.ChangeRoiPropertiesAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesFromAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi
Wrapper around RoiManager
ChangeRoiPropertiesFromAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.ChangeRoiPropertiesFromAnnotationsAlgorithm
Instantiates a new node type.
ChangeRoiPropertiesFromAnnotationsAlgorithm(ChangeRoiPropertiesFromAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.ChangeRoiPropertiesFromAnnotationsAlgorithm
Instantiates a new node type.
channelsToRGB(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converted a 3-channel image into RGB (reducing the dimensionality)
CheckBoxIcon - Class in org.hkijena.jipipe.installer.linux.ui.utils
Taken from MetalIconFactory
CheckBoxIcon() - Constructor for class org.hkijena.jipipe.installer.linux.ui.utils.CheckBoxIcon
 
CheckBoxIcon - Class in org.hkijena.jipipe.utils.ui
Taken from MetalIconFactory
CheckBoxIcon(Color) - Constructor for class org.hkijena.jipipe.utils.ui.CheckBoxIcon
 
CheckBoxMenuItemIcon - Class in org.hkijena.jipipe.utils.ui
Taken from MetalIconFactory
CheckBoxMenuItemIcon(Color) - Constructor for class org.hkijena.jipipe.utils.ui.CheckBoxMenuItemIcon
 
checkExtensionDependencies(JIPipeWorkbench) - Static method in class org.hkijena.jipipe.ui.JIPipeJsonExtensionWindow
 
checkIfWithin(Object, double, double, double, boolean, boolean) - Method in class org.hkijena.jipipe.api.JIPipeIssueReport
Reports as invalid if the value is not within the limits
checkNonEmpty(Object, Object) - Method in class org.hkijena.jipipe.api.JIPipeIssueReport
Reports as invalid if the string value is null or empty
checkNonNull(Object, Object) - Method in class org.hkijena.jipipe.api.JIPipeIssueReport
Reports as invalid if the value is null
checkPythonSettings(JIPipeIssueReport) - Static method in class org.hkijena.jipipe.extensions.cellpose.CellPoseSettings
Checks if the Python settings are valid or reports an invalid state
checkPythonSettings(JIPipeIssueReport) - Static method in class org.hkijena.jipipe.extensions.deeplearning.DeepLearningSettings
Checks if the Python settings are valid or reports an invalid state
checkPythonSettings(JIPipeIssueReport) - Static method in class org.hkijena.jipipe.extensions.python.PythonExtensionSettings
Checks if the Python settings are valid or reports an invalid state
checkRSettings() - Static method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
Checks if the R settings are valid or throws an exception
checkRSettings(JIPipeIssueReport) - Static method in class org.hkijena.jipipe.extensions.r.RExtensionSettings
Checks if the R settings are valid or reports an invalid state
checkScriptParametersValidity(JIPipeCustomParameterCollection, JIPipeIssueReport) - Static method in class org.hkijena.jipipe.utils.scripting.JythonUtils
 
checkScriptValidity(String, JIPipeCustomParameterCollection, JIPipeIssueReport) - Static method in class org.hkijena.jipipe.utils.scripting.JythonUtils
 
checkSyntax(String) - Method in class org.hkijena.jipipe.extensions.expressions.DefaultExpressionEvaluator
Checks the syntax of an expression.
checkUpdateSites(JIPipeRegistryIssues, List<JIPipeDependency>, Progress) - Method in class org.hkijena.jipipe.JIPipe
Checks the update sites of all extensions and stores the results in the issues
choosePath() - Method in class org.hkijena.jipipe.installer.linux.ui.utils.PathEditor
Opens the file chooser
choosePath() - Method in class org.hkijena.jipipe.ui.components.PathEditor
Opens the file chooser
CLAHEContrastEnhancer - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.contrast
Applies CLAHE image enhancing
CLAHEContrastEnhancer(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.contrast.CLAHEContrastEnhancer
 
CLAHEContrastEnhancer(CLAHEContrastEnhancer) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.contrast.CLAHEContrastEnhancer
Copies the algorithm
ClampFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
ClampFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.ClampFunction
 
ClampNegativeColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a min(0, x) function
ClampNegativeColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ClampNegativeColumnOperation
 
ClampPositiveColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a max(0, x) function
ClampPositiveColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.ClampPositiveColumnOperation
 
ClassFilter - Interface in org.hkijena.jipipe.utils.classfilters
 
ClassicWatershedSegmentationAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment
 
ClassicWatershedSegmentationAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment.ClassicWatershedSegmentationAlgorithm
 
ClassicWatershedSegmentationAlgorithm(ClassicWatershedSegmentationAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.segment.ClassicWatershedSegmentationAlgorithm
 
CleanBackupsRun - Class in org.hkijena.jipipe.extensions.settings
 
CleanBackupsRun(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.settings.CleanBackupsRun
 
cleanup(Map<String, Path>, Map<String, Path>, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.python.PythonUtils
 
clear(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.JIPipeProjectCache
Removes an algorithm from the cache
clear(JIPipeGraphNode, JIPipeProjectCacheState) - Method in class org.hkijena.jipipe.api.JIPipeProjectCache
Removes an algorithm from the cache
clear() - Method in class org.hkijena.jipipe.api.JIPipeProjectCache
Removes everything from the cache
clear() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Clears this graph
clear() - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Removes all parameters
clear() - Method in class org.hkijena.jipipe.extensions.parameters.table.ParameterTable
Clears the table
clear() - Method in class org.hkijena.jipipe.installer.linux.ui.utils.FormPanel
Removes all components
clear() - Method in class org.hkijena.jipipe.ui.components.FormPanel
Removes all components
clear() - Method in class org.hkijena.jipipe.ui.components.MessagePanel
 
clearAll() - Method in class org.hkijena.jipipe.api.JIPipeIssueReport
Clears all the issues in this report and all related reports
clearCurrentPath() - Method in class org.hkijena.jipipe.api.JIPipeIssueReport
Clears issues of the current path
clearData() - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlot
Removes all data from this slot
clearInputSlots(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Removes all input slots
clearLocations() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Removes all location information added via setLocationWithin()
clearLog() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfo
 
clearOutputSlots(boolean) - Method in class org.hkijena.jipipe.api.data.JIPipeDefaultMutableSlotConfiguration
Removes all output slots
clearROIs() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.plugins.ROIManagerPlugin
 
clearSearch() - Method in class org.hkijena.jipipe.ui.components.SearchBox
Clears the search field
clearSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphCanvasUI
Clears the list of selected algorithms
clearSelection() - Method in class org.hkijena.jipipe.ui.grapheditor.JIPipeGraphEditorUI
Clears the algorithm selection
clearSeries() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PlotData
Removes all series
clearSlotData() - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Clears all data slots
Clij2Absolute - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Absolute
Clij2Absolute(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Absolute
Creates a new instance
Clij2Absolute(Clij2Absolute) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Absolute
Creates a copy
Clij2AbsoluteDifference - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AbsoluteDifference
Clij2AbsoluteDifference(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AbsoluteDifference
Creates a new instance
Clij2AbsoluteDifference(Clij2AbsoluteDifference) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AbsoluteDifference
Creates a copy
Clij2AddImageAndScalar - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AddImageAndScalar
Clij2AddImageAndScalar(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AddImageAndScalar
Creates a new instance
Clij2AddImageAndScalar(Clij2AddImageAndScalar) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AddImageAndScalar
Creates a copy
Clij2AddImages - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AddImages
Clij2AddImages(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AddImages
Creates a new instance
Clij2AddImages(Clij2AddImages) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AddImages
Creates a copy
Clij2AddImagesWeighted - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AddImagesWeighted
Clij2AddImagesWeighted(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AddImagesWeighted
Creates a new instance
Clij2AddImagesWeighted(Clij2AddImagesWeighted) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AddImagesWeighted
Creates a copy
Clij2AdjacencyMatrixToTouchMatrix - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AdjacencyMatrixToTouchMatrix
Clij2AdjacencyMatrixToTouchMatrix(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AdjacencyMatrixToTouchMatrix
Creates a new instance
Clij2AdjacencyMatrixToTouchMatrix(Clij2AdjacencyMatrixToTouchMatrix) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AdjacencyMatrixToTouchMatrix
Creates a copy
Clij2AffineTransform2d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AffineTransform2D
Clij2AffineTransform2d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AffineTransform2d
Creates a new instance
Clij2AffineTransform2d(Clij2AffineTransform2d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AffineTransform2d
Creates a copy
Clij2AffineTransform3d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AffineTransform3D
Clij2AffineTransform3d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AffineTransform3d
Creates a new instance
Clij2AffineTransform3d(Clij2AffineTransform3d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AffineTransform3d
Creates a copy
Clij2ApplyVectorField2d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ApplyVectorField2D
Clij2ApplyVectorField2d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ApplyVectorField2d
Creates a new instance
Clij2ApplyVectorField2d(Clij2ApplyVectorField2d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ApplyVectorField2d
Creates a copy
Clij2ApplyVectorField3d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ApplyVectorField3D
Clij2ApplyVectorField3d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ApplyVectorField3d
Creates a new instance
Clij2ApplyVectorField3d(Clij2ApplyVectorField3d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ApplyVectorField3d
Creates a copy
Clij2ArgMaximumZProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ArgMaximumZProjection
Clij2ArgMaximumZProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ArgMaximumZProjection
Creates a new instance
Clij2ArgMaximumZProjection(Clij2ArgMaximumZProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ArgMaximumZProjection
Creates a copy
Clij2AutomaticThreshold - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AutomaticThreshold
Clij2AutomaticThreshold(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AutomaticThreshold
Creates a new instance
Clij2AutomaticThreshold(Clij2AutomaticThreshold) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AutomaticThreshold
Creates a copy
Clij2AverageDistanceOfNClosestPoints - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AverageDistanceOfNClosestPoints
Clij2AverageDistanceOfNClosestPoints(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AverageDistanceOfNClosestPoints
Creates a new instance
Clij2AverageDistanceOfNClosestPoints(Clij2AverageDistanceOfNClosestPoints) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AverageDistanceOfNClosestPoints
Creates a copy
Clij2AverageDistanceOfNFarOffPoints - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AverageDistanceOfNFarOffPoints
Clij2AverageDistanceOfNFarOffPoints(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AverageDistanceOfNFarOffPoints
Creates a new instance
Clij2AverageDistanceOfNFarOffPoints(Clij2AverageDistanceOfNFarOffPoints) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AverageDistanceOfNFarOffPoints
Creates a copy
Clij2AverageDistanceOfTouchingNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from AverageDistanceOfTouchingNeighbors
Clij2AverageDistanceOfTouchingNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AverageDistanceOfTouchingNeighbors
Creates a new instance
Clij2AverageDistanceOfTouchingNeighbors(Clij2AverageDistanceOfTouchingNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2AverageDistanceOfTouchingNeighbors
Creates a copy
Clij2BinaryAnd - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BinaryAnd
Clij2BinaryAnd(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryAnd
Creates a new instance
Clij2BinaryAnd(Clij2BinaryAnd) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryAnd
Creates a copy
Clij2BinaryEdgeDetection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BinaryEdgeDetection
Clij2BinaryEdgeDetection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryEdgeDetection
Creates a new instance
Clij2BinaryEdgeDetection(Clij2BinaryEdgeDetection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryEdgeDetection
Creates a copy
Clij2BinaryFillHoles - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BinaryFillHoles
Clij2BinaryFillHoles(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryFillHoles
Creates a new instance
Clij2BinaryFillHoles(Clij2BinaryFillHoles) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryFillHoles
Creates a copy
Clij2BinaryNot - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BinaryNot
Clij2BinaryNot(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryNot
Creates a new instance
Clij2BinaryNot(Clij2BinaryNot) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryNot
Creates a copy
Clij2BinaryOr - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BinaryOr
Clij2BinaryOr(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryOr
Creates a new instance
Clij2BinaryOr(Clij2BinaryOr) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryOr
Creates a copy
Clij2BinarySubtract - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BinarySubtract
Clij2BinarySubtract(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinarySubtract
Creates a new instance
Clij2BinarySubtract(Clij2BinarySubtract) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinarySubtract
Creates a copy
Clij2BinaryXOr - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BinaryXOr
Clij2BinaryXOr(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryXOr
Creates a new instance
Clij2BinaryXOr(Clij2BinaryXOr) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BinaryXOr
Creates a copy
Clij2BottomHatBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BottomHatBox
Clij2BottomHatBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BottomHatBox
Creates a new instance
Clij2BottomHatBox(Clij2BottomHatBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BottomHatBox
Creates a copy
Clij2BottomHatSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from BottomHatSphere
Clij2BottomHatSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BottomHatSphere
Creates a new instance
Clij2BottomHatSphere(Clij2BottomHatSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2BottomHatSphere
Creates a copy
Clij2CentroidsOfLabels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from CentroidsOfLabels
Clij2CentroidsOfLabels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CentroidsOfLabels
Creates a new instance
Clij2CentroidsOfLabels(Clij2CentroidsOfLabels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CentroidsOfLabels
Creates a copy
Clij2CloseIndexGapsInLabelMap - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from CloseIndexGapsInLabelMap
Clij2CloseIndexGapsInLabelMap(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CloseIndexGapsInLabelMap
Creates a new instance
Clij2CloseIndexGapsInLabelMap(Clij2CloseIndexGapsInLabelMap) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CloseIndexGapsInLabelMap
Creates a copy
Clij2ClosingBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ClosingBox
Clij2ClosingBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ClosingBox
Creates a new instance
Clij2ClosingBox(Clij2ClosingBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ClosingBox
Creates a copy
Clij2ClosingDiamond - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ClosingDiamond
Clij2ClosingDiamond(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ClosingDiamond
Creates a new instance
Clij2ClosingDiamond(Clij2ClosingDiamond) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ClosingDiamond
Creates a copy
Clij2CombineHorizontally - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from CombineHorizontally
Clij2CombineHorizontally(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CombineHorizontally
Creates a new instance
Clij2CombineHorizontally(Clij2CombineHorizontally) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CombineHorizontally
Creates a copy
Clij2CombineVertically - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from CombineVertically
Clij2CombineVertically(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CombineVertically
Creates a new instance
Clij2CombineVertically(Clij2CombineVertically) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CombineVertically
Creates a copy
Clij2ConcatenateStacks - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ConcatenateStacks
Clij2ConcatenateStacks(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ConcatenateStacks
Creates a new instance
Clij2ConcatenateStacks(Clij2ConcatenateStacks) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ConcatenateStacks
Creates a copy
Clij2Convolve - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Convolve
Clij2Convolve(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Convolve
Creates a new instance
Clij2Convolve(Clij2Convolve) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Convolve
Creates a copy
Clij2CountNonZeroPixels2dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from CountNonZeroPixels2DSphere
Clij2CountNonZeroPixels2dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CountNonZeroPixels2dSphere
Creates a new instance
Clij2CountNonZeroPixels2dSphere(Clij2CountNonZeroPixels2dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CountNonZeroPixels2dSphere
Creates a copy
Clij2CountNonZeroPixelsSliceBySliceSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from CountNonZeroPixelsSliceBySliceSphere
Clij2CountNonZeroPixelsSliceBySliceSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CountNonZeroPixelsSliceBySliceSphere
Creates a new instance
Clij2CountNonZeroPixelsSliceBySliceSphere(Clij2CountNonZeroPixelsSliceBySliceSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CountNonZeroPixelsSliceBySliceSphere
Creates a copy
Clij2CountNonZeroVoxels3dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from CountNonZeroVoxels3DSphere
Clij2CountNonZeroVoxels3dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CountNonZeroVoxels3dSphere
Creates a new instance
Clij2CountNonZeroVoxels3dSphere(Clij2CountNonZeroVoxels3dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CountNonZeroVoxels3dSphere
Creates a copy
Clij2CountTouchingNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from CountTouchingNeighbors
Clij2CountTouchingNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CountTouchingNeighbors
Creates a new instance
Clij2CountTouchingNeighbors(Clij2CountTouchingNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2CountTouchingNeighbors
Creates a copy
Clij2Crop2d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Crop2D
Clij2Crop2d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Crop2d
Creates a new instance
Clij2Crop2d(Clij2Crop2d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Crop2d
Creates a copy
Clij2Crop3d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Crop3D
Clij2Crop3d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Crop3d
Creates a new instance
Clij2Crop3d(Clij2Crop3d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Crop3d
Creates a copy
Clij2DepthColorProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DepthColorProjection
Clij2DepthColorProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DepthColorProjection
Creates a new instance
Clij2DepthColorProjection(Clij2DepthColorProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DepthColorProjection
Creates a copy
Clij2DetectLabelEdges - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DetectLabelEdges
Clij2DetectLabelEdges(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DetectLabelEdges
Creates a new instance
Clij2DetectLabelEdges(Clij2DetectLabelEdges) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DetectLabelEdges
Creates a copy
Clij2DetectMaximaSliceBySliceBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DetectMaximaSliceBySliceBox
Clij2DetectMaximaSliceBySliceBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DetectMaximaSliceBySliceBox
Creates a new instance
Clij2DetectMaximaSliceBySliceBox(Clij2DetectMaximaSliceBySliceBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DetectMaximaSliceBySliceBox
Creates a copy
Clij2DetectMinimaSliceBySliceBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DetectMinimaSliceBySliceBox
Clij2DetectMinimaSliceBySliceBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DetectMinimaSliceBySliceBox
Creates a new instance
Clij2DetectMinimaSliceBySliceBox(Clij2DetectMinimaSliceBySliceBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DetectMinimaSliceBySliceBox
Creates a copy
Clij2DifferenceOfGaussian2d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DifferenceOfGaussian2D
Clij2DifferenceOfGaussian2d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DifferenceOfGaussian2d
Creates a new instance
Clij2DifferenceOfGaussian2d(Clij2DifferenceOfGaussian2d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DifferenceOfGaussian2d
Creates a copy
Clij2DifferenceOfGaussian3d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DifferenceOfGaussian3D
Clij2DifferenceOfGaussian3d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DifferenceOfGaussian3d
Creates a new instance
Clij2DifferenceOfGaussian3d(Clij2DifferenceOfGaussian3d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DifferenceOfGaussian3d
Creates a copy
Clij2DilateBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DilateBox
Clij2DilateBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DilateBox
Creates a new instance
Clij2DilateBox(Clij2DilateBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DilateBox
Creates a copy
Clij2DilateBoxSliceBySlice - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DilateBoxSliceBySlice
Clij2DilateBoxSliceBySlice(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DilateBoxSliceBySlice
Creates a new instance
Clij2DilateBoxSliceBySlice(Clij2DilateBoxSliceBySlice) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DilateBoxSliceBySlice
Creates a copy
Clij2DilateSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DilateSphere
Clij2DilateSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DilateSphere
Creates a new instance
Clij2DilateSphere(Clij2DilateSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DilateSphere
Creates a copy
Clij2DilateSphereSliceBySlice - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DilateSphereSliceBySlice
Clij2DilateSphereSliceBySlice(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DilateSphereSliceBySlice
Creates a new instance
Clij2DilateSphereSliceBySlice(Clij2DilateSphereSliceBySlice) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DilateSphereSliceBySlice
Creates a copy
Clij2DistanceMap - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DistanceMap
Clij2DistanceMap(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DistanceMap
Creates a new instance
Clij2DistanceMap(Clij2DistanceMap) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DistanceMap
Creates a copy
Clij2DivideImages - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DivideImages
Clij2DivideImages(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DivideImages
Creates a new instance
Clij2DivideImages(Clij2DivideImages) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DivideImages
Creates a copy
Clij2DownsampleSliceBySliceHalfMedian - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from DownsampleSliceBySliceHalfMedian
Clij2DownsampleSliceBySliceHalfMedian(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DownsampleSliceBySliceHalfMedian
Creates a new instance
Clij2DownsampleSliceBySliceHalfMedian(Clij2DownsampleSliceBySliceHalfMedian) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2DownsampleSliceBySliceHalfMedian
Creates a copy
Clij2EntropyBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from EntropyBox
Clij2EntropyBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2EntropyBox
Creates a new instance
Clij2EntropyBox(Clij2EntropyBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2EntropyBox
Creates a copy
Clij2Equal - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Equal
Clij2Equal(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Equal
Creates a new instance
Clij2Equal(Clij2Equal) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Equal
Creates a copy
Clij2EqualConstant - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from EqualConstant
Clij2EqualConstant(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2EqualConstant
Creates a new instance
Clij2EqualConstant(Clij2EqualConstant) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2EqualConstant
Creates a copy
Clij2EqualizeMeanIntensitiesOfSlices - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from EqualizeMeanIntensitiesOfSlices
Clij2EqualizeMeanIntensitiesOfSlices(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2EqualizeMeanIntensitiesOfSlices
Creates a new instance
Clij2EqualizeMeanIntensitiesOfSlices(Clij2EqualizeMeanIntensitiesOfSlices) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2EqualizeMeanIntensitiesOfSlices
Creates a copy
Clij2ErodeBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ErodeBox
Clij2ErodeBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ErodeBox
Creates a new instance
Clij2ErodeBox(Clij2ErodeBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ErodeBox
Creates a copy
Clij2ErodeBoxSliceBySlice - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ErodeBoxSliceBySlice
Clij2ErodeBoxSliceBySlice(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ErodeBoxSliceBySlice
Creates a new instance
Clij2ErodeBoxSliceBySlice(Clij2ErodeBoxSliceBySlice) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ErodeBoxSliceBySlice
Creates a copy
Clij2ErodeSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ErodeSphere
Clij2ErodeSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ErodeSphere
Creates a new instance
Clij2ErodeSphere(Clij2ErodeSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ErodeSphere
Creates a copy
Clij2ErodeSphereSliceBySlice - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ErodeSphereSliceBySlice
Clij2ErodeSphereSliceBySlice(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ErodeSphereSliceBySlice
Creates a new instance
Clij2ErodeSphereSliceBySlice(Clij2ErodeSphereSliceBySlice) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ErodeSphereSliceBySlice
Creates a copy
Clij2ExcludeLabels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ExcludeLabels
Clij2ExcludeLabels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabels
Creates a new instance
Clij2ExcludeLabels(Clij2ExcludeLabels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabels
Creates a copy
Clij2ExcludeLabelsOnEdges - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ExcludeLabelsOnEdges
Clij2ExcludeLabelsOnEdges(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsOnEdges
Creates a new instance
Clij2ExcludeLabelsOnEdges(Clij2ExcludeLabelsOnEdges) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsOnEdges
Creates a copy
Clij2ExcludeLabelsOnSurface - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ExcludeLabelsOnSurface
Clij2ExcludeLabelsOnSurface(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsOnSurface
Creates a new instance
Clij2ExcludeLabelsOnSurface(Clij2ExcludeLabelsOnSurface) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsOnSurface
Creates a copy
Clij2ExcludeLabelsSubSurface - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ExcludeLabelsSubSurface
Clij2ExcludeLabelsSubSurface(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsSubSurface
Creates a new instance
Clij2ExcludeLabelsSubSurface(Clij2ExcludeLabelsSubSurface) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsSubSurface
Creates a copy
Clij2ExcludeLabelsWithValuesOutOfRange - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ExcludeLabelsWithValuesOutOfRange
Clij2ExcludeLabelsWithValuesOutOfRange(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsWithValuesOutOfRange
Creates a new instance
Clij2ExcludeLabelsWithValuesOutOfRange(Clij2ExcludeLabelsWithValuesOutOfRange) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsWithValuesOutOfRange
Creates a copy
Clij2ExcludeLabelsWithValuesWithinRange - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ExcludeLabelsWithValuesWithinRange
Clij2ExcludeLabelsWithValuesWithinRange(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsWithValuesWithinRange
Creates a new instance
Clij2ExcludeLabelsWithValuesWithinRange(Clij2ExcludeLabelsWithValuesWithinRange) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExcludeLabelsWithValuesWithinRange
Creates a copy
Clij2ExecuteKernelIterating - Class in org.hkijena.jipipe.extensions.clij2.algorithms
 
Clij2ExecuteKernelIterating(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
Clij2ExecuteKernelIterating(Clij2ExecuteKernelIterating) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelIterating
 
Clij2ExecuteKernelSimpleIterating - Class in org.hkijena.jipipe.extensions.clij2.algorithms
 
Clij2ExecuteKernelSimpleIterating(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
Clij2ExecuteKernelSimpleIterating(Clij2ExecuteKernelSimpleIterating) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExecuteKernelSimpleIterating
 
Clij2Exponential - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Exponential
Clij2Exponential(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Exponential
Creates a new instance
Clij2Exponential(Clij2Exponential) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Exponential
Creates a copy
Clij2ExtendLabelingViaVoronoi - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ExtendLabelingViaVoronoi
Clij2ExtendLabelingViaVoronoi(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExtendLabelingViaVoronoi
Creates a new instance
Clij2ExtendLabelingViaVoronoi(Clij2ExtendLabelingViaVoronoi) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ExtendLabelingViaVoronoi
Creates a copy
Clij2FloodFillDiamond - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from FloodFillDiamond
Clij2FloodFillDiamond(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2FloodFillDiamond
Creates a new instance
Clij2FloodFillDiamond(Clij2FloodFillDiamond) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2FloodFillDiamond
Creates a copy
Clij2GaussianBlur2d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GaussianBlur2D
Clij2GaussianBlur2d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GaussianBlur2d
Creates a new instance
Clij2GaussianBlur2d(Clij2GaussianBlur2d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GaussianBlur2d
Creates a copy
Clij2GaussianBlur3d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GaussianBlur3D
Clij2GaussianBlur3d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GaussianBlur3d
Creates a new instance
Clij2GaussianBlur3d(Clij2GaussianBlur3d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GaussianBlur3d
Creates a copy
Clij2GenerateBinaryOverlapMatrix - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GenerateBinaryOverlapMatrix
Clij2GenerateBinaryOverlapMatrix(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateBinaryOverlapMatrix
Creates a new instance
Clij2GenerateBinaryOverlapMatrix(Clij2GenerateBinaryOverlapMatrix) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateBinaryOverlapMatrix
Creates a copy
Clij2GenerateDistanceMatrix - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GenerateDistanceMatrix
Clij2GenerateDistanceMatrix(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateDistanceMatrix
Creates a new instance
Clij2GenerateDistanceMatrix(Clij2GenerateDistanceMatrix) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateDistanceMatrix
Creates a copy
Clij2GenerateJaccardIndexMatrix - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GenerateJaccardIndexMatrix
Clij2GenerateJaccardIndexMatrix(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateJaccardIndexMatrix
Creates a new instance
Clij2GenerateJaccardIndexMatrix(Clij2GenerateJaccardIndexMatrix) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateJaccardIndexMatrix
Creates a copy
Clij2GenerateParametricImage - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GenerateParametricImage
Clij2GenerateParametricImage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateParametricImage
Creates a new instance
Clij2GenerateParametricImage(Clij2GenerateParametricImage) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateParametricImage
Creates a copy
Clij2GenerateParametricImageFromResultsTableColumn - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GenerateParametricImageFromResultsTableColumn
Clij2GenerateParametricImageFromResultsTableColumn(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateParametricImageFromResultsTableColumn
Creates a new instance
Clij2GenerateParametricImageFromResultsTableColumn(Clij2GenerateParametricImageFromResultsTableColumn) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateParametricImageFromResultsTableColumn
Creates a copy
Clij2GenerateTouchCountMatrix - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GenerateTouchCountMatrix
Clij2GenerateTouchCountMatrix(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateTouchCountMatrix
Creates a new instance
Clij2GenerateTouchCountMatrix(Clij2GenerateTouchCountMatrix) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateTouchCountMatrix
Creates a copy
Clij2GenerateTouchMatrix - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GenerateTouchMatrix
Clij2GenerateTouchMatrix(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateTouchMatrix
Creates a new instance
Clij2GenerateTouchMatrix(Clij2GenerateTouchMatrix) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GenerateTouchMatrix
Creates a copy
Clij2GetJaccardIndex - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GetJaccardIndex
Clij2GetJaccardIndex(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GetJaccardIndex
Creates a new instance
Clij2GetJaccardIndex(Clij2GetJaccardIndex) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GetJaccardIndex
Creates a copy
Clij2GetMeanSquaredError - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GetMeanSquaredError
Clij2GetMeanSquaredError(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GetMeanSquaredError
Creates a new instance
Clij2GetMeanSquaredError(Clij2GetMeanSquaredError) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GetMeanSquaredError
Creates a copy
Clij2GetSorensenDiceCoefficient - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GetSorensenDiceCoefficient
Clij2GetSorensenDiceCoefficient(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GetSorensenDiceCoefficient
Creates a new instance
Clij2GetSorensenDiceCoefficient(Clij2GetSorensenDiceCoefficient) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GetSorensenDiceCoefficient
Creates a copy
Clij2GradientX - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GradientX
Clij2GradientX(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GradientX
Creates a new instance
Clij2GradientX(Clij2GradientX) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GradientX
Creates a copy
Clij2GradientY - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GradientY
Clij2GradientY(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GradientY
Creates a new instance
Clij2GradientY(Clij2GradientY) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GradientY
Creates a copy
Clij2GradientZ - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GradientZ
Clij2GradientZ(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GradientZ
Creates a new instance
Clij2GradientZ(Clij2GradientZ) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GradientZ
Creates a copy
Clij2Greater - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Greater
Clij2Greater(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Greater
Creates a new instance
Clij2Greater(Clij2Greater) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Greater
Creates a copy
Clij2GreaterConstant - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GreaterConstant
Clij2GreaterConstant(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GreaterConstant
Creates a new instance
Clij2GreaterConstant(Clij2GreaterConstant) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GreaterConstant
Creates a copy
Clij2GreaterOrEqual - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GreaterOrEqual
Clij2GreaterOrEqual(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GreaterOrEqual
Creates a new instance
Clij2GreaterOrEqual(Clij2GreaterOrEqual) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GreaterOrEqual
Creates a copy
Clij2GreaterOrEqualConstant - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from GreaterOrEqualConstant
Clij2GreaterOrEqualConstant(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GreaterOrEqualConstant
Creates a new instance
Clij2GreaterOrEqualConstant(Clij2GreaterOrEqualConstant) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2GreaterOrEqualConstant
Creates a copy
Clij2Histogram - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Histogram
Clij2Histogram(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Histogram
Creates a new instance
Clij2Histogram(Clij2Histogram) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Histogram
Creates a copy
Clij2ImageToStack - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ImageToStack
Clij2ImageToStack(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ImageToStack
Creates a new instance
Clij2ImageToStack(Clij2ImageToStack) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ImageToStack
Creates a copy
Clij2Invert - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Invert
Clij2Invert(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Invert
Creates a new instance
Clij2Invert(Clij2Invert) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Invert
Creates a copy
Clij2JaccardIndex - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from JaccardIndex
Clij2JaccardIndex(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2JaccardIndex
Creates a new instance
Clij2JaccardIndex(Clij2JaccardIndex) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2JaccardIndex
Creates a copy
Clij2LabelCentroidsToPointList - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from LabelCentroidsToPointList
Clij2LabelCentroidsToPointList(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelCentroidsToPointList
Creates a new instance
Clij2LabelCentroidsToPointList(Clij2LabelCentroidsToPointList) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelCentroidsToPointList
Creates a copy
Clij2LabelledSpotsToPointList - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from LabelledSpotsToPointList
Clij2LabelledSpotsToPointList(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelledSpotsToPointList
Creates a new instance
Clij2LabelledSpotsToPointList(Clij2LabelledSpotsToPointList) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelledSpotsToPointList
Creates a copy
Clij2LabelSpots - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from LabelSpots
Clij2LabelSpots(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelSpots
Creates a new instance
Clij2LabelSpots(Clij2LabelSpots) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelSpots
Creates a copy
Clij2LabelToMask - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from LabelToMask
Clij2LabelToMask(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelToMask
Creates a new instance
Clij2LabelToMask(Clij2LabelToMask) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelToMask
Creates a copy
Clij2LabelVoronoiOctagon - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from LabelVoronoiOctagon
Clij2LabelVoronoiOctagon(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelVoronoiOctagon
Creates a new instance
Clij2LabelVoronoiOctagon(Clij2LabelVoronoiOctagon) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LabelVoronoiOctagon
Creates a copy
Clij2LaplaceBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from LaplaceBox
Clij2LaplaceBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LaplaceBox
Creates a new instance
Clij2LaplaceBox(Clij2LaplaceBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LaplaceBox
Creates a copy
Clij2LaplaceDiamond - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from LaplaceDiamond
Clij2LaplaceDiamond(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LaplaceDiamond
Creates a new instance
Clij2LaplaceDiamond(Clij2LaplaceDiamond) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LaplaceDiamond
Creates a copy
Clij2LocalThreshold - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from LocalThreshold
Clij2LocalThreshold(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LocalThreshold
Creates a new instance
Clij2LocalThreshold(Clij2LocalThreshold) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2LocalThreshold
Creates a copy
Clij2Logarithm - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Logarithm
Clij2Logarithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Logarithm
Creates a new instance
Clij2Logarithm(Clij2Logarithm) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Logarithm
Creates a copy
Clij2Mask - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Mask
Clij2Mask(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mask
Creates a new instance
Clij2Mask(Clij2Mask) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mask
Creates a copy
Clij2MaskLabel - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaskLabel
Clij2MaskLabel(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaskLabel
Creates a new instance
Clij2MaskLabel(Clij2MaskLabel) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaskLabel
Creates a copy
Clij2MaskStackWithPlane - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaskStackWithPlane
Clij2MaskStackWithPlane(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaskStackWithPlane
Creates a new instance
Clij2MaskStackWithPlane(Clij2MaskStackWithPlane) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaskStackWithPlane
Creates a copy
Clij2Maximum2dBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Maximum2DBox
Clij2Maximum2dBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Maximum2dBox
Creates a new instance
Clij2Maximum2dBox(Clij2Maximum2dBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Maximum2dBox
Creates a copy
Clij2Maximum2dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Maximum2DSphere
Clij2Maximum2dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Maximum2dSphere
Creates a new instance
Clij2Maximum2dSphere(Clij2Maximum2dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Maximum2dSphere
Creates a copy
Clij2Maximum3dBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Maximum3DBox
Clij2Maximum3dBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Maximum3dBox
Creates a new instance
Clij2Maximum3dBox(Clij2Maximum3dBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Maximum3dBox
Creates a copy
Clij2Maximum3dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Maximum3DSphere
Clij2Maximum3dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Maximum3dSphere
Creates a new instance
Clij2Maximum3dSphere(Clij2Maximum3dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Maximum3dSphere
Creates a copy
Clij2MaximumImageAndScalar - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumImageAndScalar
Clij2MaximumImageAndScalar(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumImageAndScalar
Creates a new instance
Clij2MaximumImageAndScalar(Clij2MaximumImageAndScalar) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumImageAndScalar
Creates a copy
Clij2MaximumImages - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumImages
Clij2MaximumImages(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumImages
Creates a new instance
Clij2MaximumImages(Clij2MaximumImages) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumImages
Creates a copy
Clij2MaximumOctagon - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumOctagon
Clij2MaximumOctagon(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumOctagon
Creates a new instance
Clij2MaximumOctagon(Clij2MaximumOctagon) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumOctagon
Creates a copy
Clij2MaximumOfMaskedPixels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumOfMaskedPixels
Clij2MaximumOfMaskedPixels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumOfMaskedPixels
Creates a new instance
Clij2MaximumOfMaskedPixels(Clij2MaximumOfMaskedPixels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumOfMaskedPixels
Creates a copy
Clij2MaximumOfTouchingNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumOfTouchingNeighbors
Clij2MaximumOfTouchingNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumOfTouchingNeighbors
Creates a new instance
Clij2MaximumOfTouchingNeighbors(Clij2MaximumOfTouchingNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumOfTouchingNeighbors
Creates a copy
Clij2MaximumSliceBySliceSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumSliceBySliceSphere
Clij2MaximumSliceBySliceSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumSliceBySliceSphere
Creates a new instance
Clij2MaximumSliceBySliceSphere(Clij2MaximumSliceBySliceSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumSliceBySliceSphere
Creates a copy
Clij2MaximumXProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumXProjection
Clij2MaximumXProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumXProjection
Creates a new instance
Clij2MaximumXProjection(Clij2MaximumXProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumXProjection
Creates a copy
Clij2MaximumYProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumYProjection
Clij2MaximumYProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumYProjection
Creates a new instance
Clij2MaximumYProjection(Clij2MaximumYProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumYProjection
Creates a copy
Clij2MaximumZProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumZProjection
Clij2MaximumZProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumZProjection
Creates a new instance
Clij2MaximumZProjection(Clij2MaximumZProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumZProjection
Creates a copy
Clij2MaximumZProjectionBounded - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MaximumZProjectionBounded
Clij2MaximumZProjectionBounded(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumZProjectionBounded
Creates a new instance
Clij2MaximumZProjectionBounded(Clij2MaximumZProjectionBounded) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MaximumZProjectionBounded
Creates a copy
Clij2Mean2dBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Mean2DBox
Clij2Mean2dBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mean2dBox
Creates a new instance
Clij2Mean2dBox(Clij2Mean2dBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mean2dBox
Creates a copy
Clij2Mean2dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Mean2DSphere
Clij2Mean2dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mean2dSphere
Creates a new instance
Clij2Mean2dSphere(Clij2Mean2dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mean2dSphere
Creates a copy
Clij2Mean3dBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Mean3DBox
Clij2Mean3dBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mean3dBox
Creates a new instance
Clij2Mean3dBox(Clij2Mean3dBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mean3dBox
Creates a copy
Clij2Mean3dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Mean3DSphere
Clij2Mean3dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mean3dSphere
Creates a new instance
Clij2Mean3dSphere(Clij2Mean3dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Mean3dSphere
Creates a copy
Clij2MeanClosestSpotDistance - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanClosestSpotDistance
Clij2MeanClosestSpotDistance(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanClosestSpotDistance
Creates a new instance
Clij2MeanClosestSpotDistance(Clij2MeanClosestSpotDistance) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanClosestSpotDistance
Creates a copy
Clij2MeanOfMaskedPixels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanOfMaskedPixels
Clij2MeanOfMaskedPixels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanOfMaskedPixels
Creates a new instance
Clij2MeanOfMaskedPixels(Clij2MeanOfMaskedPixels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanOfMaskedPixels
Creates a copy
Clij2MeanOfTouchingNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanOfTouchingNeighbors
Clij2MeanOfTouchingNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanOfTouchingNeighbors
Creates a new instance
Clij2MeanOfTouchingNeighbors(Clij2MeanOfTouchingNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanOfTouchingNeighbors
Creates a copy
Clij2MeanSliceBySliceSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanSliceBySliceSphere
Clij2MeanSliceBySliceSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanSliceBySliceSphere
Creates a new instance
Clij2MeanSliceBySliceSphere(Clij2MeanSliceBySliceSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanSliceBySliceSphere
Creates a copy
Clij2MeanSquaredError - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanSquaredError
Clij2MeanSquaredError(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanSquaredError
Creates a new instance
Clij2MeanSquaredError(Clij2MeanSquaredError) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanSquaredError
Creates a copy
Clij2MeanXProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanXProjection
Clij2MeanXProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanXProjection
Creates a new instance
Clij2MeanXProjection(Clij2MeanXProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanXProjection
Creates a copy
Clij2MeanYProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanYProjection
Clij2MeanYProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanYProjection
Creates a new instance
Clij2MeanYProjection(Clij2MeanYProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanYProjection
Creates a copy
Clij2MeanZProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanZProjection
Clij2MeanZProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanZProjection
Creates a new instance
Clij2MeanZProjection(Clij2MeanZProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanZProjection
Creates a copy
Clij2MeanZProjectionBounded - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MeanZProjectionBounded
Clij2MeanZProjectionBounded(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanZProjectionBounded
Creates a new instance
Clij2MeanZProjectionBounded(Clij2MeanZProjectionBounded) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MeanZProjectionBounded
Creates a copy
Clij2Median2dBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Median2DBox
Clij2Median2dBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Median2dBox
Creates a new instance
Clij2Median2dBox(Clij2Median2dBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Median2dBox
Creates a copy
Clij2Median2dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Median2DSphere
Clij2Median2dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Median2dSphere
Creates a new instance
Clij2Median2dSphere(Clij2Median2dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Median2dSphere
Creates a copy
Clij2Median3dBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Median3DBox
Clij2Median3dBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Median3dBox
Creates a new instance
Clij2Median3dBox(Clij2Median3dBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Median3dBox
Creates a copy
Clij2Median3dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Median3DSphere
Clij2Median3dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Median3dSphere
Creates a new instance
Clij2Median3dSphere(Clij2Median3dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Median3dSphere
Creates a copy
Clij2MedianOfTouchingNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MedianOfTouchingNeighbors
Clij2MedianOfTouchingNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MedianOfTouchingNeighbors
Creates a new instance
Clij2MedianOfTouchingNeighbors(Clij2MedianOfTouchingNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MedianOfTouchingNeighbors
Creates a copy
Clij2MedianSliceBySliceBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MedianSliceBySliceBox
Clij2MedianSliceBySliceBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MedianSliceBySliceBox
Creates a new instance
Clij2MedianSliceBySliceBox(Clij2MedianSliceBySliceBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MedianSliceBySliceBox
Creates a copy
Clij2MedianSliceBySliceSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MedianSliceBySliceSphere
Clij2MedianSliceBySliceSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MedianSliceBySliceSphere
Creates a new instance
Clij2MedianSliceBySliceSphere(Clij2MedianSliceBySliceSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MedianSliceBySliceSphere
Creates a copy
Clij2MedianZProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MedianZProjection
Clij2MedianZProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MedianZProjection
Creates a new instance
Clij2MedianZProjection(Clij2MedianZProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MedianZProjection
Creates a copy
Clij2Minimum2dBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Minimum2DBox
Clij2Minimum2dBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Minimum2dBox
Creates a new instance
Clij2Minimum2dBox(Clij2Minimum2dBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Minimum2dBox
Creates a copy
Clij2Minimum2dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Minimum2DSphere
Clij2Minimum2dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Minimum2dSphere
Creates a new instance
Clij2Minimum2dSphere(Clij2Minimum2dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Minimum2dSphere
Creates a copy
Clij2Minimum3dBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Minimum3DBox
Clij2Minimum3dBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Minimum3dBox
Creates a new instance
Clij2Minimum3dBox(Clij2Minimum3dBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Minimum3dBox
Creates a copy
Clij2Minimum3dSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Minimum3DSphere
Clij2Minimum3dSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Minimum3dSphere
Creates a new instance
Clij2Minimum3dSphere(Clij2Minimum3dSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Minimum3dSphere
Creates a copy
Clij2MinimumDistanceOfTouchingNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumDistanceOfTouchingNeighbors
Clij2MinimumDistanceOfTouchingNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumDistanceOfTouchingNeighbors
Creates a new instance
Clij2MinimumDistanceOfTouchingNeighbors(Clij2MinimumDistanceOfTouchingNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumDistanceOfTouchingNeighbors
Creates a copy
Clij2MinimumImageAndScalar - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumImageAndScalar
Clij2MinimumImageAndScalar(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumImageAndScalar
Creates a new instance
Clij2MinimumImageAndScalar(Clij2MinimumImageAndScalar) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumImageAndScalar
Creates a copy
Clij2MinimumImages - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumImages
Clij2MinimumImages(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumImages
Creates a new instance
Clij2MinimumImages(Clij2MinimumImages) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumImages
Creates a copy
Clij2MinimumOctagon - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumOctagon
Clij2MinimumOctagon(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumOctagon
Creates a new instance
Clij2MinimumOctagon(Clij2MinimumOctagon) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumOctagon
Creates a copy
Clij2MinimumOfMaskedPixels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumOfMaskedPixels
Clij2MinimumOfMaskedPixels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumOfMaskedPixels
Creates a new instance
Clij2MinimumOfMaskedPixels(Clij2MinimumOfMaskedPixels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumOfMaskedPixels
Creates a copy
Clij2MinimumOfTouchingNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumOfTouchingNeighbors
Clij2MinimumOfTouchingNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumOfTouchingNeighbors
Creates a new instance
Clij2MinimumOfTouchingNeighbors(Clij2MinimumOfTouchingNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumOfTouchingNeighbors
Creates a copy
Clij2MinimumSliceBySliceSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumSliceBySliceSphere
Clij2MinimumSliceBySliceSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumSliceBySliceSphere
Creates a new instance
Clij2MinimumSliceBySliceSphere(Clij2MinimumSliceBySliceSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumSliceBySliceSphere
Creates a copy
Clij2MinimumXProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumXProjection
Clij2MinimumXProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumXProjection
Creates a new instance
Clij2MinimumXProjection(Clij2MinimumXProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumXProjection
Creates a copy
Clij2MinimumYProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumYProjection
Clij2MinimumYProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumYProjection
Creates a new instance
Clij2MinimumYProjection(Clij2MinimumYProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumYProjection
Creates a copy
Clij2MinimumZProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumZProjection
Clij2MinimumZProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumZProjection
Creates a new instance
Clij2MinimumZProjection(Clij2MinimumZProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumZProjection
Creates a copy
Clij2MinimumZProjectionBounded - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumZProjectionBounded
Clij2MinimumZProjectionBounded(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumZProjectionBounded
Creates a new instance
Clij2MinimumZProjectionBounded(Clij2MinimumZProjectionBounded) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumZProjectionBounded
Creates a copy
Clij2MinimumZProjectionThresholdedBounded - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MinimumZProjectionThresholdedBounded
Clij2MinimumZProjectionThresholdedBounded(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumZProjectionThresholdedBounded
Creates a new instance
Clij2MinimumZProjectionThresholdedBounded(Clij2MinimumZProjectionThresholdedBounded) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MinimumZProjectionThresholdedBounded
Creates a copy
Clij2MultiplyImageAndCoordinate - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MultiplyImageAndCoordinate
Clij2MultiplyImageAndCoordinate(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyImageAndCoordinate
Creates a new instance
Clij2MultiplyImageAndCoordinate(Clij2MultiplyImageAndCoordinate) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyImageAndCoordinate
Creates a copy
Clij2MultiplyImageAndScalar - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MultiplyImageAndScalar
Clij2MultiplyImageAndScalar(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyImageAndScalar
Creates a new instance
Clij2MultiplyImageAndScalar(Clij2MultiplyImageAndScalar) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyImageAndScalar
Creates a copy
Clij2MultiplyImages - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MultiplyImages
Clij2MultiplyImages(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyImages
Creates a new instance
Clij2MultiplyImages(Clij2MultiplyImages) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyImages
Creates a copy
Clij2MultiplyImageStackWithScalars - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MultiplyImageStackWithScalars
Clij2MultiplyImageStackWithScalars(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyImageStackWithScalars
Creates a new instance
Clij2MultiplyImageStackWithScalars(Clij2MultiplyImageStackWithScalars) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyImageStackWithScalars
Creates a copy
Clij2MultiplyMatrix - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MultiplyMatrix
Clij2MultiplyMatrix(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyMatrix
Creates a new instance
Clij2MultiplyMatrix(Clij2MultiplyMatrix) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyMatrix
Creates a copy
Clij2MultiplyStackWithPlane - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from MultiplyStackWithPlane
Clij2MultiplyStackWithPlane(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyStackWithPlane
Creates a new instance
Clij2MultiplyStackWithPlane(Clij2MultiplyStackWithPlane) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2MultiplyStackWithPlane
Creates a copy
Clij2NClosestDistances - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NClosestDistances
Clij2NClosestDistances(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NClosestDistances
Creates a new instance
Clij2NClosestDistances(Clij2NClosestDistances) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NClosestDistances
Creates a copy
Clij2NClosestPoints - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NClosestPoints
Clij2NClosestPoints(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NClosestPoints
Creates a new instance
Clij2NClosestPoints(Clij2NClosestPoints) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NClosestPoints
Creates a copy
Clij2NeighborsOfNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NeighborsOfNeighbors
Clij2NeighborsOfNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NeighborsOfNeighbors
Creates a new instance
Clij2NeighborsOfNeighbors(Clij2NeighborsOfNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NeighborsOfNeighbors
Creates a copy
Clij2NonzeroMaximumBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NonzeroMaximumBox
Clij2NonzeroMaximumBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NonzeroMaximumBox
Creates a new instance
Clij2NonzeroMaximumBox(Clij2NonzeroMaximumBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NonzeroMaximumBox
Creates a copy
Clij2NonzeroMaximumDiamond - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NonzeroMaximumDiamond
Clij2NonzeroMaximumDiamond(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NonzeroMaximumDiamond
Creates a new instance
Clij2NonzeroMaximumDiamond(Clij2NonzeroMaximumDiamond) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NonzeroMaximumDiamond
Creates a copy
Clij2NonzeroMinimumBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NonzeroMinimumBox
Clij2NonzeroMinimumBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NonzeroMinimumBox
Creates a new instance
Clij2NonzeroMinimumBox(Clij2NonzeroMinimumBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NonzeroMinimumBox
Creates a copy
Clij2NonzeroMinimumDiamond - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NonzeroMinimumDiamond
Clij2NonzeroMinimumDiamond(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NonzeroMinimumDiamond
Creates a new instance
Clij2NonzeroMinimumDiamond(Clij2NonzeroMinimumDiamond) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NonzeroMinimumDiamond
Creates a copy
Clij2NotEqual - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NotEqual
Clij2NotEqual(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NotEqual
Creates a new instance
Clij2NotEqual(Clij2NotEqual) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NotEqual
Creates a copy
Clij2NotEqualConstant - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from NotEqualConstant
Clij2NotEqualConstant(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NotEqualConstant
Creates a new instance
Clij2NotEqualConstant(Clij2NotEqualConstant) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2NotEqualConstant
Creates a copy
Clij2OnlyzeroOverwriteMaximumBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from OnlyzeroOverwriteMaximumBox
Clij2OnlyzeroOverwriteMaximumBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2OnlyzeroOverwriteMaximumBox
Creates a new instance
Clij2OnlyzeroOverwriteMaximumBox(Clij2OnlyzeroOverwriteMaximumBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2OnlyzeroOverwriteMaximumBox
Creates a copy
Clij2OnlyzeroOverwriteMaximumDiamond - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from OnlyzeroOverwriteMaximumDiamond
Clij2OnlyzeroOverwriteMaximumDiamond(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2OnlyzeroOverwriteMaximumDiamond
Creates a new instance
Clij2OnlyzeroOverwriteMaximumDiamond(Clij2OnlyzeroOverwriteMaximumDiamond) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2OnlyzeroOverwriteMaximumDiamond
Creates a copy
Clij2OpeningBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from OpeningBox
Clij2OpeningBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2OpeningBox
Creates a new instance
Clij2OpeningBox(Clij2OpeningBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2OpeningBox
Creates a copy
Clij2OpeningDiamond - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from OpeningDiamond
Clij2OpeningDiamond(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2OpeningDiamond
Creates a new instance
Clij2OpeningDiamond(Clij2OpeningDiamond) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2OpeningDiamond
Creates a copy
Clij2Paste2d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Paste2D
Clij2Paste2d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Paste2d
Creates a new instance
Clij2Paste2d(Clij2Paste2d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Paste2d
Creates a copy
Clij2Paste3d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Paste3D
Clij2Paste3d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Paste3d
Creates a new instance
Clij2Paste3d(Clij2Paste3d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Paste3d
Creates a copy
Clij2PointIndexListToMesh - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from PointIndexListToMesh
Clij2PointIndexListToMesh(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PointIndexListToMesh
Creates a new instance
Clij2PointIndexListToMesh(Clij2PointIndexListToMesh) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PointIndexListToMesh
Creates a copy
Clij2PointlistToLabelledSpots - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from PointlistToLabelledSpots
Clij2PointlistToLabelledSpots(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PointlistToLabelledSpots
Creates a new instance
Clij2PointlistToLabelledSpots(Clij2PointlistToLabelledSpots) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PointlistToLabelledSpots
Creates a copy
Clij2Power - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Power
Clij2Power(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Power
Creates a new instance
Clij2Power(Clij2Power) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Power
Creates a copy
Clij2PowerImages - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from PowerImages
Clij2PowerImages(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PowerImages
Creates a new instance
Clij2PowerImages(Clij2PowerImages) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PowerImages
Creates a copy
Clij2PullToResultsTable - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from PullToResultsTable
Clij2PullToResultsTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PullToResultsTable
Creates a new instance
Clij2PullToResultsTable(Clij2PullToResultsTable) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PullToResultsTable
Creates a copy
Clij2PushResultsTable - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from PushResultsTable
Clij2PushResultsTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PushResultsTable
Creates a new instance
Clij2PushResultsTable(Clij2PushResultsTable) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2PushResultsTable
Creates a copy
Clij2ReduceStack - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ReduceStack
Clij2ReduceStack(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ReduceStack
Creates a new instance
Clij2ReduceStack(Clij2ReduceStack) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ReduceStack
Creates a copy
Clij2ReplaceIntensities - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ReplaceIntensities
Clij2ReplaceIntensities(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ReplaceIntensities
Creates a new instance
Clij2ReplaceIntensities(Clij2ReplaceIntensities) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ReplaceIntensities
Creates a copy
Clij2ReplaceIntensity - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ReplaceIntensity
Clij2ReplaceIntensity(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ReplaceIntensity
Creates a new instance
Clij2ReplaceIntensity(Clij2ReplaceIntensity) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ReplaceIntensity
Creates a copy
Clij2ReplacePixelsIfZero - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ReplacePixelsIfZero
Clij2ReplacePixelsIfZero(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ReplacePixelsIfZero
Creates a new instance
Clij2ReplacePixelsIfZero(Clij2ReplacePixelsIfZero) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ReplacePixelsIfZero
Creates a copy
Clij2ResliceBottom - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ResliceBottom
Clij2ResliceBottom(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceBottom
Creates a new instance
Clij2ResliceBottom(Clij2ResliceBottom) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceBottom
Creates a copy
Clij2ResliceLeft - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ResliceLeft
Clij2ResliceLeft(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceLeft
Creates a new instance
Clij2ResliceLeft(Clij2ResliceLeft) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceLeft
Creates a copy
Clij2ResliceRadial - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ResliceRadial
Clij2ResliceRadial(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceRadial
Creates a new instance
Clij2ResliceRadial(Clij2ResliceRadial) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceRadial
Creates a copy
Clij2ResliceRight - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ResliceRight
Clij2ResliceRight(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceRight
Creates a new instance
Clij2ResliceRight(Clij2ResliceRight) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceRight
Creates a copy
Clij2ResliceTop - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ResliceTop
Clij2ResliceTop(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceTop
Creates a new instance
Clij2ResliceTop(Clij2ResliceTop) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ResliceTop
Creates a copy
Clij2RotateClockwise - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from RotateClockwise
Clij2RotateClockwise(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2RotateClockwise
Creates a new instance
Clij2RotateClockwise(Clij2RotateClockwise) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2RotateClockwise
Creates a copy
Clij2RotateCounterClockwise - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from RotateCounterClockwise
Clij2RotateCounterClockwise(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2RotateCounterClockwise
Creates a new instance
Clij2RotateCounterClockwise(Clij2RotateCounterClockwise) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2RotateCounterClockwise
Creates a copy
Clij2Scale2d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Scale2D
Clij2Scale2d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Scale2d
Creates a new instance
Clij2Scale2d(Clij2Scale2d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Scale2d
Creates a copy
Clij2Scale3d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Scale3D
Clij2Scale3d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Scale3d
Creates a new instance
Clij2Scale3d(Clij2Scale3d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Scale3d
Creates a copy
Clij2SetNonZeroPixelsToPixelIndex - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SetNonZeroPixelsToPixelIndex
Clij2SetNonZeroPixelsToPixelIndex(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SetNonZeroPixelsToPixelIndex
Creates a new instance
Clij2SetNonZeroPixelsToPixelIndex(Clij2SetNonZeroPixelsToPixelIndex) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SetNonZeroPixelsToPixelIndex
Creates a copy
Clij2ShortestDistances - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ShortestDistances
Clij2ShortestDistances(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ShortestDistances
Creates a new instance
Clij2ShortestDistances(Clij2ShortestDistances) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ShortestDistances
Creates a copy
Clij2Smaller - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Smaller
Clij2Smaller(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Smaller
Creates a new instance
Clij2Smaller(Clij2Smaller) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Smaller
Creates a copy
Clij2SmallerConstant - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SmallerConstant
Clij2SmallerConstant(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SmallerConstant
Creates a new instance
Clij2SmallerConstant(Clij2SmallerConstant) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SmallerConstant
Creates a copy
Clij2SmallerOrEqual - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SmallerOrEqual
Clij2SmallerOrEqual(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SmallerOrEqual
Creates a new instance
Clij2SmallerOrEqual(Clij2SmallerOrEqual) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SmallerOrEqual
Creates a copy
Clij2SmallerOrEqualConstant - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SmallerOrEqualConstant
Clij2SmallerOrEqualConstant(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SmallerOrEqualConstant
Creates a new instance
Clij2SmallerOrEqualConstant(Clij2SmallerOrEqualConstant) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SmallerOrEqualConstant
Creates a copy
Clij2Sobel - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Sobel
Clij2Sobel(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Sobel
Creates a new instance
Clij2Sobel(Clij2Sobel) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Sobel
Creates a copy
Clij2SorensenDiceCoefficient - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SorensenDiceCoefficient
Clij2SorensenDiceCoefficient(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SorensenDiceCoefficient
Creates a new instance
Clij2SorensenDiceCoefficient(Clij2SorensenDiceCoefficient) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SorensenDiceCoefficient
Creates a copy
Clij2SpotsToPointList1 - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SpotsToPointList
Clij2SpotsToPointList1(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SpotsToPointList1
Creates a new instance
Clij2SpotsToPointList1(Clij2SpotsToPointList1) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SpotsToPointList1
Creates a copy
Clij2SquaredDifference - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SquaredDifference
Clij2SquaredDifference(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SquaredDifference
Creates a new instance
Clij2SquaredDifference(Clij2SquaredDifference) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SquaredDifference
Creates a copy
Clij2StandardDeviationOfMaskedPixels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from StandardDeviationOfMaskedPixels
Clij2StandardDeviationOfMaskedPixels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StandardDeviationOfMaskedPixels
Creates a new instance
Clij2StandardDeviationOfMaskedPixels(Clij2StandardDeviationOfMaskedPixels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StandardDeviationOfMaskedPixels
Creates a copy
Clij2StandardDeviationOfTouchingNeighbors - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from StandardDeviationOfTouchingNeighbors
Clij2StandardDeviationOfTouchingNeighbors(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StandardDeviationOfTouchingNeighbors
Creates a new instance
Clij2StandardDeviationOfTouchingNeighbors(Clij2StandardDeviationOfTouchingNeighbors) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StandardDeviationOfTouchingNeighbors
Creates a copy
Clij2StandardDeviationZProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from StandardDeviationZProjection
Clij2StandardDeviationZProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StandardDeviationZProjection
Creates a new instance
Clij2StandardDeviationZProjection(Clij2StandardDeviationZProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StandardDeviationZProjection
Creates a copy
Clij2StatisticsOfBackgroundAndLabelledPixels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from StatisticsOfBackgroundAndLabelledPixels
Clij2StatisticsOfBackgroundAndLabelledPixels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StatisticsOfBackgroundAndLabelledPixels
Creates a new instance
Clij2StatisticsOfBackgroundAndLabelledPixels(Clij2StatisticsOfBackgroundAndLabelledPixels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StatisticsOfBackgroundAndLabelledPixels
Creates a copy
Clij2StatisticsOfImage - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from StatisticsOfImage
Clij2StatisticsOfImage(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StatisticsOfImage
Creates a new instance
Clij2StatisticsOfImage(Clij2StatisticsOfImage) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StatisticsOfImage
Creates a copy
Clij2StatisticsOfLabelledPixels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from StatisticsOfLabelledPixels
Clij2StatisticsOfLabelledPixels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StatisticsOfLabelledPixels
Creates a new instance
Clij2StatisticsOfLabelledPixels(Clij2StatisticsOfLabelledPixels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2StatisticsOfLabelledPixels
Creates a copy
Clij2SubtractImageFromScalar - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SubtractImageFromScalar
Clij2SubtractImageFromScalar(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SubtractImageFromScalar
Creates a new instance
Clij2SubtractImageFromScalar(Clij2SubtractImageFromScalar) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SubtractImageFromScalar
Creates a copy
Clij2SubtractImages - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SubtractImages
Clij2SubtractImages(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SubtractImages
Creates a new instance
Clij2SubtractImages(Clij2SubtractImages) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SubtractImages
Creates a copy
Clij2SumImageSliceBySlice - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SumImageSliceBySlice
Clij2SumImageSliceBySlice(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SumImageSliceBySlice
Creates a new instance
Clij2SumImageSliceBySlice(Clij2SumImageSliceBySlice) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SumImageSliceBySlice
Creates a copy
Clij2SumXProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SumXProjection
Clij2SumXProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SumXProjection
Creates a new instance
Clij2SumXProjection(Clij2SumXProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SumXProjection
Creates a copy
Clij2SumYProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SumYProjection
Clij2SumYProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SumYProjection
Creates a new instance
Clij2SumYProjection(Clij2SumYProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SumYProjection
Creates a copy
Clij2SumZProjection - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from SumZProjection
Clij2SumZProjection(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SumZProjection
Creates a new instance
Clij2SumZProjection(Clij2SumZProjection) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2SumZProjection
Creates a copy
Clij2Threshold - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Threshold
Clij2Threshold(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Threshold
Creates a new instance
Clij2Threshold(Clij2Threshold) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Threshold
Creates a copy
Clij2ThresholdDefault - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdDefault
Clij2ThresholdDefault(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdDefault
Creates a new instance
Clij2ThresholdDefault(Clij2ThresholdDefault) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdDefault
Creates a copy
Clij2ThresholdHuang - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdHuang
Clij2ThresholdHuang(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdHuang
Creates a new instance
Clij2ThresholdHuang(Clij2ThresholdHuang) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdHuang
Creates a copy
Clij2ThresholdIjIsoData - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdIJ_IsoData
Clij2ThresholdIjIsoData(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdIjIsoData
Creates a new instance
Clij2ThresholdIjIsoData(Clij2ThresholdIjIsoData) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdIjIsoData
Creates a copy
Clij2ThresholdIntermodes - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdIntermodes
Clij2ThresholdIntermodes(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdIntermodes
Creates a new instance
Clij2ThresholdIntermodes(Clij2ThresholdIntermodes) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdIntermodes
Creates a copy
Clij2ThresholdIsoData - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdIsoData
Clij2ThresholdIsoData(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdIsoData
Creates a new instance
Clij2ThresholdIsoData(Clij2ThresholdIsoData) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdIsoData
Creates a copy
Clij2ThresholdLi - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdLi
Clij2ThresholdLi(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdLi
Creates a new instance
Clij2ThresholdLi(Clij2ThresholdLi) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdLi
Creates a copy
Clij2ThresholdMaxEntropy - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdMaxEntropy
Clij2ThresholdMaxEntropy(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMaxEntropy
Creates a new instance
Clij2ThresholdMaxEntropy(Clij2ThresholdMaxEntropy) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMaxEntropy
Creates a copy
Clij2ThresholdMean - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdMean
Clij2ThresholdMean(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMean
Creates a new instance
Clij2ThresholdMean(Clij2ThresholdMean) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMean
Creates a copy
Clij2ThresholdMinError - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdMinError
Clij2ThresholdMinError(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMinError
Creates a new instance
Clij2ThresholdMinError(Clij2ThresholdMinError) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMinError
Creates a copy
Clij2ThresholdMinimum - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdMinimum
Clij2ThresholdMinimum(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMinimum
Creates a new instance
Clij2ThresholdMinimum(Clij2ThresholdMinimum) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMinimum
Creates a copy
Clij2ThresholdMoments - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdMoments
Clij2ThresholdMoments(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMoments
Creates a new instance
Clij2ThresholdMoments(Clij2ThresholdMoments) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdMoments
Creates a copy
Clij2ThresholdOtsu - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdOtsu
Clij2ThresholdOtsu(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdOtsu
Creates a new instance
Clij2ThresholdOtsu(Clij2ThresholdOtsu) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdOtsu
Creates a copy
Clij2ThresholdPercentile - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdPercentile
Clij2ThresholdPercentile(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdPercentile
Creates a new instance
Clij2ThresholdPercentile(Clij2ThresholdPercentile) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdPercentile
Creates a copy
Clij2ThresholdRenyiEntropy - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdRenyiEntropy
Clij2ThresholdRenyiEntropy(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdRenyiEntropy
Creates a new instance
Clij2ThresholdRenyiEntropy(Clij2ThresholdRenyiEntropy) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdRenyiEntropy
Creates a copy
Clij2ThresholdShanbhag - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdShanbhag
Clij2ThresholdShanbhag(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdShanbhag
Creates a new instance
Clij2ThresholdShanbhag(Clij2ThresholdShanbhag) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdShanbhag
Creates a copy
Clij2ThresholdTriangle - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdTriangle
Clij2ThresholdTriangle(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdTriangle
Creates a new instance
Clij2ThresholdTriangle(Clij2ThresholdTriangle) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdTriangle
Creates a copy
Clij2ThresholdYen - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from ThresholdYen
Clij2ThresholdYen(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdYen
Creates a new instance
Clij2ThresholdYen(Clij2ThresholdYen) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2ThresholdYen
Creates a copy
Clij2TopHatBox - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from TopHatBox
Clij2TopHatBox(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TopHatBox
Creates a new instance
Clij2TopHatBox(Clij2TopHatBox) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TopHatBox
Creates a copy
Clij2TopHatSphere - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from TopHatSphere
Clij2TopHatSphere(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TopHatSphere
Creates a new instance
Clij2TopHatSphere(Clij2TopHatSphere) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TopHatSphere
Creates a copy
Clij2TouchMatrixToAdjacencyMatrix - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from TouchMatrixToAdjacencyMatrix
Clij2TouchMatrixToAdjacencyMatrix(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TouchMatrixToAdjacencyMatrix
Creates a new instance
Clij2TouchMatrixToAdjacencyMatrix(Clij2TouchMatrixToAdjacencyMatrix) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TouchMatrixToAdjacencyMatrix
Creates a copy
Clij2TouchMatrixToMesh - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from TouchMatrixToMesh
Clij2TouchMatrixToMesh(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TouchMatrixToMesh
Creates a new instance
Clij2TouchMatrixToMesh(Clij2TouchMatrixToMesh) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TouchMatrixToMesh
Creates a copy
Clij2Translate2d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Translate2D
Clij2Translate2d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Translate2d
Creates a new instance
Clij2Translate2d(Clij2Translate2d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Translate2d
Creates a copy
Clij2Translate3d - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Translate3D
Clij2Translate3d(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Translate3d
Creates a new instance
Clij2Translate3d(Clij2Translate3d) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Translate3d
Creates a copy
Clij2TransposeXy - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from TransposeXY
Clij2TransposeXy(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TransposeXy
Creates a new instance
Clij2TransposeXy(Clij2TransposeXy) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TransposeXy
Creates a copy
Clij2TransposeXz - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from TransposeXZ
Clij2TransposeXz(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TransposeXz
Creates a new instance
Clij2TransposeXz(Clij2TransposeXz) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TransposeXz
Creates a copy
Clij2TransposeYz - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from TransposeYZ
Clij2TransposeYz(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TransposeYz
Creates a new instance
Clij2TransposeYz(Clij2TransposeYz) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2TransposeYz
Creates a copy
Clij2UndefinedToZero - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from UndefinedToZero
Clij2UndefinedToZero(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2UndefinedToZero
Creates a new instance
Clij2UndefinedToZero(Clij2UndefinedToZero) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2UndefinedToZero
Creates a copy
Clij2VarianceOfMaskedPixels - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from VarianceOfMaskedPixels
Clij2VarianceOfMaskedPixels(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2VarianceOfMaskedPixels
Creates a new instance
Clij2VarianceOfMaskedPixels(Clij2VarianceOfMaskedPixels) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2VarianceOfMaskedPixels
Creates a copy
Clij2VoronoiLabeling - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from VoronoiLabeling
Clij2VoronoiLabeling(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2VoronoiLabeling
Creates a new instance
Clij2VoronoiLabeling(Clij2VoronoiLabeling) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2VoronoiLabeling
Creates a copy
Clij2VoronoiOctagon - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from VoronoiOctagon
Clij2VoronoiOctagon(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2VoronoiOctagon
Creates a new instance
Clij2VoronoiOctagon(Clij2VoronoiOctagon) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2VoronoiOctagon
Creates a copy
Clij2Watershed - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from Watershed
Clij2Watershed(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Watershed
Creates a new instance
Clij2Watershed(Clij2Watershed) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2Watershed
Creates a copy
Clij2WriteValuesToPositions - Class in org.hkijena.jipipe.extensions.clij2.algorithms
CLIJ2 algorithm ported from WriteValuesToPositions
Clij2WriteValuesToPositions(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2WriteValuesToPositions
Creates a new instance
Clij2WriteValuesToPositions(Clij2WriteValuesToPositions) - Constructor for class org.hkijena.jipipe.extensions.clij2.algorithms.Clij2WriteValuesToPositions
Creates a copy
CLIJControlPanel - Class in org.hkijena.jipipe.extensions.clij2.ui
Graphical control panel for CLIJ
CLIJControlPanel(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.clij2.ui.CLIJControlPanel
 
CLIJControlPanelJIPipeMenuExtension - Class in org.hkijena.jipipe.extensions.clij2.ui
Adds a menu item that allows to control CLIJ
CLIJControlPanelJIPipeMenuExtension(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.clij2.ui.CLIJControlPanelJIPipeMenuExtension
Creates a new instance
CLIJExtension - Class in org.hkijena.jipipe.extensions.clij2
Integrates CLIJ
CLIJExtension() - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJExtension
 
CLIJImageData - Class in org.hkijena.jipipe.extensions.clij2.datatypes
Contains a CLIJ image
CLIJImageData(ClearCLBuffer) - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
Initializes a new instance from an existing buffer
CLIJImageData(ImagePlusData) - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
Initializes an instance by copying data from ImagePlusData
CLIJImageData(CLIJImageData) - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageData
Makes a copy
CLIJImageDataImageJAdapter - Class in org.hkijena.jipipe.extensions.clij2.datatypes
Adapter for CLIJImageData
CLIJImageDataImageJAdapter() - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageDataImageJAdapter
 
CLIJImageToImagePlusDataConverter - Class in org.hkijena.jipipe.extensions.clij2.datatypes
Converter from CLIJImageData to ImagePlusData
CLIJImageToImagePlusDataConverter(Class<? extends JIPipeData>) - Constructor for class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageToImagePlusDataConverter
 
CLIJSettings - Class in org.hkijena.jipipe.extensions.clij2
Settings for CLIJ
CLIJSettings() - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJSettings
 
CLIJSettings.ContrastEnhancerSettings - Class in org.hkijena.jipipe.extensions.clij2
 
cloneTableModel(DefaultTableModel) - Static method in class org.hkijena.jipipe.utils.TableUtils
Copies a table
close() - Method in class org.hkijena.jipipe.api.JIPipeProgressInfoOutputStream
 
close() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROGateway
 
close() - Method in class org.hkijena.jipipe.extensions.omero.util.OMEROImageUploader
 
close() - Method in class org.hkijena.jipipe.utils.ui.BusyCursor
 
CloseAllImageJWindowsTool - Class in org.hkijena.jipipe.extensions.tools
 
CloseAllImageJWindowsTool(JIPipeWorkbench) - Constructor for class org.hkijena.jipipe.extensions.tools.CloseAllImageJWindowsTool
Creates a new instance
closeAllTabs() - Method in class org.hkijena.jipipe.ui.components.DocumentTabPane
Closes all tabs
closeMessage() - Method in class org.hkijena.jipipe.ui.components.MessagePanel.Message
 
closeTab(DocumentTabPane.DocumentTab) - Method in class org.hkijena.jipipe.ui.components.DocumentTabPane
Closes the tab.
collapse(IOInterfaceAlgorithm) - Static method in class org.hkijena.jipipe.api.compartments.algorithms.IOInterfaceAlgorithm
Removes the interface and directly connects the inputs and outputs
CollapseIOInterfaceNodeUIContextAction - Class in org.hkijena.jipipe.ui.grapheditor.contextmenu
 
CollapseIOInterfaceNodeUIContextAction() - Constructor for class org.hkijena.jipipe.ui.grapheditor.contextmenu.CollapseIOInterfaceNodeUIContextAction
 
COLOR_CONSTANT - Static variable in class org.hkijena.jipipe.extensions.expressions.ExpressionBuilderUI
 
COLOR_FUNCTION - Static variable in class org.hkijena.jipipe.extensions.expressions.ExpressionBuilderUI
 
COLOR_GLOBAL - Static variable in class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateListCellRenderer
 
COLOR_MAP - Static variable in class org.hkijena.jipipe.utils.ColorUtils
 
COLOR_OPERATOR - Static variable in class org.hkijena.jipipe.extensions.expressions.ExpressionBuilderUI
 
COLOR_PROJECT - Static variable in class org.hkijena.jipipe.extensions.nodetemplate.JIPipeNodeTemplateListCellRenderer
 
COLOR_SELECTED - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.ImageViewerPanelDisplayRangeControl.TrackRenderer
 
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorRGBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
The color space of this image
COLOR_SPACE - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData
The color space of this image
COLOR_STRING - Static variable in class org.hkijena.jipipe.extensions.expressions.ExpressionBuilderUI
 
COLOR_UNSELECTED - Static variable in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.ImageViewerPanelDisplayRangeControl.TrackRenderer
 
COLOR_VARIABLE - Static variable in class org.hkijena.jipipe.extensions.expressions.ExpressionBuilderUI
 
ColorChooserButton - Class in org.hkijena.jipipe.ui.components
 
ColorChooserButton() - Constructor for class org.hkijena.jipipe.ui.components.ColorChooserButton
 
ColorChooserButton(String) - Constructor for class org.hkijena.jipipe.ui.components.ColorChooserButton
 
ColorChooserButton.ColorChosenEvent - Class in org.hkijena.jipipe.ui.components
 
ColorChosenEvent(ColorChooserButton, Color) - Constructor for class org.hkijena.jipipe.ui.components.ColorChooserButton.ColorChosenEvent
 
ColorDeserializer - Class in org.hkijena.jipipe.extensions.parameters.colors
Deserializer for Color
ColorDeserializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorDeserializer
 
ColoredImagePlusData - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color
ImagePlusData that has a color space attached to it.
ColorIcon - Class in org.hkijena.jipipe.ui.components
Icon that is only one specific color, including border
ColorIcon() - Constructor for class org.hkijena.jipipe.ui.components.ColorIcon
Creates a 16x16 black icon
ColorIcon(int, int) - Constructor for class org.hkijena.jipipe.ui.components.ColorIcon
Creates a black icon
ColorIcon(int, int, Color) - Constructor for class org.hkijena.jipipe.ui.components.ColorIcon
Creates an icon with black borders
ColorIcon(int, int, Color, Color) - Constructor for class org.hkijena.jipipe.ui.components.ColorIcon
 
ColorListParameter - Class in org.hkijena.jipipe.extensions.parameters.colors
 
ColorListParameter() - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorListParameter
 
ColorListParameter(Collection<Color>) - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorListParameter
 
ColorMap - Enum in org.hkijena.jipipe.extensions.parameters.colors
All available color maps
ColorMap - Enum in org.hkijena.jipipe.extensions.plots.utils
 
ColorMapEnumItemInfo - Class in org.hkijena.jipipe.extensions.parameters.colors
EnumItemInfo implementation for ColorMap
ColorMapEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorMapEnumItemInfo
Creates a new instance
ColorMapEnumItemInfo - Class in org.hkijena.jipipe.extensions.plots.utils
 
ColorMapEnumItemInfo() - Constructor for class org.hkijena.jipipe.extensions.plots.utils.ColorMapEnumItemInfo
 
ColorMapIcon - Class in org.hkijena.jipipe.extensions.parameters.colors
Icon that renders a color map entry
ColorMapIcon() - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorMapIcon
Creates a 16x16 black icon
ColorMapIcon(int, int) - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorMapIcon
Creates a viridis icon
ColorMapIcon(int, int, ColorMap) - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorMapIcon
 
ColorMapIcon - Class in org.hkijena.jipipe.extensions.plots.utils
 
ColorMapIcon(int, int, ColorMap) - Constructor for class org.hkijena.jipipe.extensions.plots.utils.ColorMapIcon
 
ColorMapSupplier - Class in org.hkijena.jipipe.extensions.plots.utils
Provides a color palette
ColorMapSupplier(Paint[]) - Constructor for class org.hkijena.jipipe.extensions.plots.utils.ColorMapSupplier
 
ColorParameterEditorUI - Class in org.hkijena.jipipe.extensions.parameters.colors
Parameter editor for String
ColorParameterEditorUI(JIPipeWorkbench, JIPipeParameterAccess) - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorParameterEditorUI
 
ColorPixel5DExpressionParameterVariableSource - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
Variable source that allows to address x, y
ColorPixel5DExpressionParameterVariableSource() - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ColorPixel5DExpressionParameterVariableSource
 
ColorRoiByStatisticsAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi
Wrapper around RoiManager
ColorRoiByStatisticsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.ColorRoiByStatisticsAlgorithm
Instantiates a new node type.
ColorRoiByStatisticsAlgorithm(ColorRoiByStatisticsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.ColorRoiByStatisticsAlgorithm
Instantiates a new node type.
ColorSerializer - Class in org.hkijena.jipipe.extensions.parameters.colors
Serializer for Color
ColorSerializer() - Constructor for class org.hkijena.jipipe.extensions.parameters.colors.ColorSerializer
 
ColorSpace - Interface in org.hkijena.jipipe.extensions.imagejdatatypes.color
A class that governs conversion between color spaces
ColorSpaceConverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color
 
ColorSpaceConverterAlgorithm(JIPipeNodeInfo, Class<? extends ColoredImagePlusData>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm
 
ColorSpaceConverterAlgorithm(ColorSpaceConverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.color.ColorSpaceConverterAlgorithm
 
ColorThresholdExpression2D - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.color
 
ColorThresholdExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.color.ColorThresholdExpression2D
 
ColorThresholdExpression2D(ColorThresholdExpression2D) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.color.ColorThresholdExpression2D
 
ColorToGreyscaleExpression2D - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color
 
ColorToGreyscaleExpression2D(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color.ColorToGreyscaleExpression2D
 
ColorToGreyscaleExpression2D(ColorToGreyscaleExpression2D) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color.ColorToGreyscaleExpression2D
 
colorToHexString(Color) - Static method in class org.hkijena.jipipe.installer.linux.ui.utils.StringUtils
Converts a color to a Hex string
colorToHexString(Color) - Static method in class org.hkijena.jipipe.utils.ColorUtils
Converts a color to a Hex string
ColorUtils - Class in org.hkijena.jipipe.utils
 
ColorUtils() - Constructor for class org.hkijena.jipipe.utils.ColorUtils
 
column - Variable in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData.Index
 
ColumnContentType - Enum in org.hkijena.jipipe.extensions.tables
Available column content types
ColumnOperation - Interface in org.hkijena.jipipe.extensions.tables
An operation on a TableColumn
ColumnOperationAdapterFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
ColumnOperationAdapterFunction(ColumnOperation, String) - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.ColumnOperationAdapterFunction
 
ColumnOperationEntry(String, ColumnOperation, String, String, String) - Constructor for class org.hkijena.jipipe.api.registries.JIPipeExpressionRegistry.ColumnOperationEntry
Creates a new entry
ColumnsToAnnotationsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.algorithms
 
ColumnsToAnnotationsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ColumnsToAnnotationsAlgorithm
 
ColumnsToAnnotationsAlgorithm(ColumnsToAnnotationsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ColumnsToAnnotationsAlgorithm
 
ColumnToNumericAlgorithm - Class in org.hkijena.jipipe.extensions.tables.algorithms
Algorithm that removes columns
ColumnToNumericAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ColumnToNumericAlgorithm
Creates a new instance
ColumnToNumericAlgorithm(ColumnToNumericAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ColumnToNumericAlgorithm
Creates a copy
ColumnToStringAlgorithm - Class in org.hkijena.jipipe.extensions.tables.algorithms
Algorithm that removes columns
ColumnToStringAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ColumnToStringAlgorithm
Creates a new instance
ColumnToStringAlgorithm(ColumnToStringAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ColumnToStringAlgorithm
Creates a copy
CombineChannelsToRGBAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color
 
CombineChannelsToRGBAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color.CombineChannelsToRGBAlgorithm
 
CombineChannelsToRGBAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.color.CombineChannelsToRGBAlgorithm
 
combineSlices(Map<ImageSliceIndex, ImageProcessor>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Combines the slices in the map into one image.
compare(T, T) - Method in class org.hkijena.jipipe.utils.NaturalOrderComparator
 
comparePlugins(PluginInfo<?>, PluginInfo<?>) - Static method in class org.hkijena.jipipe.JIPipe
Compares two plugins and sorts them by priority
comparePriority(JIPipeParameterAccess, JIPipeParameterAccess) - Static method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterAccess
Compares the priority
compareTo(JIPipeAnnotation) - Method in class org.hkijena.jipipe.api.data.JIPipeAnnotation
 
compareTo(JIPipeDataInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataInfo
 
compareTo(JIPipeProjectCacheState) - Method in class org.hkijena.jipipe.api.JIPipeProjectCacheState
 
compareTo(JIPipeDataBatch) - Method in class org.hkijena.jipipe.api.nodes.JIPipeDataBatch
 
compareTo(JIPipeMergingDataBatch) - Method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatch
 
compareTo(JIPipeNotification) - Method in class org.hkijena.jipipe.api.notifications.JIPipeNotification
 
compareTo(JIPipeParameterTypeInfo) - Method in interface org.hkijena.jipipe.api.parameters.JIPipeParameterTypeInfo
 
compareTo(ImageJUtils.GradientStop) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils.GradientStop
 
compareTo(RankedData<T>) - Method in class org.hkijena.jipipe.utils.search.RankedData
 
compareVersions(String, String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Compares two version strings.
CompartmentAddedEvent(JIPipeProjectCompartment) - Constructor for class org.hkijena.jipipe.api.JIPipeProject.CompartmentAddedEvent
 
CompartmentNodeTypeCategory - Class in org.hkijena.jipipe.api.compartments.algorithms
 
CompartmentNodeTypeCategory() - Constructor for class org.hkijena.jipipe.api.compartments.algorithms.CompartmentNodeTypeCategory
 
CompartmentRemovedEvent(JIPipeProjectCompartment, UUID) - Constructor for class org.hkijena.jipipe.api.JIPipeProject.CompartmentRemovedEvent
 
composeInheritanceConversions(Map<JIPipeDataInfo, JIPipeDataInfo>, Map<JIPipeDataInfo, JIPipeDataInfo>) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Creates the composition of two inheritance conversions.
composeRawInheritanceConversions(Map<Class<? extends JIPipeData>, Class<? extends JIPipeData>>, Map<Class<? extends JIPipeData>, Class<? extends JIPipeData>>) - Static method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Creates the composition of two inheritance conversions.
CompoundGraphHistorySnapshot - Class in org.hkijena.jipipe.api.history
 
CompoundGraphHistorySnapshot(List<JIPipeAlgorithmGraphHistorySnapshot>) - Constructor for class org.hkijena.jipipe.api.history.CompoundGraphHistorySnapshot
 
computeFileSHA1(File) - Static method in class org.hkijena.jipipe.utils.PathUtils
Computes the SHA1 of a file
ConcatenateByParameter - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
ConcatenateByParameter(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenateByParameter
 
ConcatenateByParameter(ConcatenateByParameter) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenateByParameter
Copies the algorithm
ConcatenatePaths - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
ConcatenatePaths(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenatePaths
 
ConcatenatePaths(ConcatenatePaths) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConcatenatePaths
Copies the algorithm
ConditionalInverterAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
 
ConditionalInverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.ConditionalInverterAlgorithm
 
ConditionalInverterAlgorithm(ConditionalInverterAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.ConditionalInverterAlgorithm
 
ConditionalInverterAlgorithm.VariableSource - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
 
ConditionValuePair() - Constructor for class org.hkijena.jipipe.ui.parameters.AdaptiveParameterBuilder.ConditionValuePair
 
ConditionValuePairUI(AdaptiveParameterBuilder, AdaptiveParameterBuilder.ConditionValuePair) - Constructor for class org.hkijena.jipipe.ui.parameters.AdaptiveParameterBuilder.ConditionValuePairUI
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.cellpose.CellPoseEnvInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.cellpose.CellPoseGPUEnvInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.deeplearning.environments.TensorFlowEnvInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.MinicondaEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectSystemPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.installers.SelectVirtualEnvPythonInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironmentInstaller.Configuration
 
Configuration() - Constructor for class org.hkijena.jipipe.extensions.r.installers.REnvInstaller.Configuration
 
configure() - Method in class org.hkijena.jipipe.extensions.python.installers.BasicMinicondaEnvPythonInstaller
UI configuration
configure() - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironmentInstaller
UI configuration
ConfirmingButton - Class in org.hkijena.jipipe.ui.components
Button that shows a nice confirmation of some action taken
ConfirmingButton() - Constructor for class org.hkijena.jipipe.ui.components.ConfirmingButton
Creates a button
ConfirmingButton(Icon) - Constructor for class org.hkijena.jipipe.ui.components.ConfirmingButton
 
ConfirmingButton(String) - Constructor for class org.hkijena.jipipe.ui.components.ConfirmingButton
 
ConfirmingButton(Action) - Constructor for class org.hkijena.jipipe.ui.components.ConfirmingButton
 
ConfirmingButton(String, Icon) - Constructor for class org.hkijena.jipipe.ui.components.ConfirmingButton
 
confirmResetParameters(JIPipeWorkbench, String) - Static method in class org.hkijena.jipipe.utils.UIUtils
 
ConflictDialog - Class in org.hkijena.jipipe.ui.ijupdater
Copy of ConflictDialog because the original one expects an UpdaterFrame
ConflictDialog(Window, String) - Constructor for class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
conflictList - Variable in class org.hkijena.jipipe.ui.ijupdater.ConflictDialog
 
conflicts - Variable in class org.hkijena.jipipe.ui.ijupdater.ResolveDependencies
 
connect(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Connects an output slot to an input slot.
connect(JIPipeDataSlot, JIPipeDataSlot, boolean) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Connects an output slot to an input slot.
connectCompartments(JIPipeProjectCompartment, JIPipeProjectCompartment) - Method in class org.hkijena.jipipe.api.JIPipeProject
Connects two compartments
ConnectedComponentsLabeling2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
 
ConnectedComponentsLabeling2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.ConnectedComponentsLabeling2DAlgorithm
Instantiates a new node type.
ConnectedComponentsLabeling2DAlgorithm(ConnectedComponentsLabeling2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.ConnectedComponentsLabeling2DAlgorithm
Instantiates a new node type.
ConnectedComponentsLabeling3DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
 
ConnectedComponentsLabeling3DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.ConnectedComponentsLabeling3DAlgorithm
Instantiates a new node type.
ConnectedComponentsLabeling3DAlgorithm(ConnectedComponentsLabeling3DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.ConnectedComponentsLabeling3DAlgorithm
Instantiates a new node type.
connectSlot(JIPipeDataSlot, JIPipeDataSlot) - Method in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeDataSlotUI
Connects the two slots
CONSTANT_E - Static variable in class org.hkijena.jipipe.extensions.expressions.DefaultExpressionEvaluator
 
CONSTANT_FALSE - Static variable in class org.hkijena.jipipe.extensions.expressions.DefaultExpressionEvaluator
 
CONSTANT_PI - Static variable in class org.hkijena.jipipe.extensions.expressions.DefaultExpressionEvaluator
 
CONSTANT_TAU - Static variable in class org.hkijena.jipipe.extensions.expressions.DefaultExpressionEvaluator
 
CONSTANT_TRUE - Static variable in class org.hkijena.jipipe.extensions.expressions.DefaultExpressionEvaluator
 
containsColumn(String) - Method in class org.hkijena.jipipe.extensions.parameters.table.ParameterTable
 
containsColumn(String) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Returns true if the column exists
containsKey(String) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Returns true if there is a parameter with given key
containsNode(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if this graph contains the algorithm
containsNode(JIPipeDataSlot) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraph
Returns true if the slot is in this graph
containsOnlyRoisOfType(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Returns if this ROI list only contains ROI of given type
ContainsOperator - Class in org.hkijena.jipipe.extensions.expressions.operators
Operator that tests if the left string is contained in the right string
ContainsOperator() - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.ContainsOperator
 
ContainsOperator2 - Class in org.hkijena.jipipe.extensions.expressions.operators
Operator that tests if the left string is contained in the right string
ContainsOperator2() - Constructor for class org.hkijena.jipipe.extensions.expressions.operators.ContainsOperator2
 
ContainsStringPredicateFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
ContainsStringPredicateFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.ContainsStringPredicateFunction
 
context() - Method in class org.hkijena.jipipe.ui.components.SplashScreen
 
context() - Method in class org.hkijena.jipipe.ui.parameters.JIPipeParameterEditorUI
 
context() - Method in class org.hkijena.jipipe.ui.parameters.ParameterPanel
 
ContextAction(Object, Method, URL, JIPipeDocumentation) - Constructor for class org.hkijena.jipipe.api.parameters.JIPipeParameterTree.ContextAction
 
Contrast(ImagePlus, int, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
ContrastEnhancerSettings() - Constructor for class org.hkijena.jipipe.extensions.clij2.CLIJSettings.ContrastEnhancerSettings
 
ContrastLocalAutoThreshold2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local
Segmenter node that thresholds via an auto threshold Based on code from Auto_Local_Threshold
ContrastLocalAutoThreshold2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
 
ContrastLocalAutoThreshold2DAlgorithm(ContrastLocalAutoThreshold2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.threshold.local.ContrastLocalAutoThreshold2DAlgorithm
Copies the algorithm
CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.installer.linux.ui.utils.ModernMetalTheme
 
CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.ui.theme.DarkModernMetalTheme
 
CONTROL_TEXT_COLOR - Static variable in class org.hkijena.jipipe.ui.theme.ModernMetalTheme
 
convert(JIPipeData) - Method in interface org.hkijena.jipipe.api.data.JIPipeDataConverter
Converts the supported input type to the output type
convert(JIPipeData, Class<? extends JIPipeData>) - Method in class org.hkijena.jipipe.api.registries.JIPipeDatatypeRegistry
Converts the input data to the output data type
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.annotation.algorithms.ImplicitResultsTableDataConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageToImagePlusDataConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.ImagePlusDataToCLIJImageDataConverter
 
convert(Object) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ToBooleanFunction
 
convert(Object) - Method in class org.hkijena.jipipe.extensions.expressions.functions.ToNumberFunction
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.filesystem.algorithms.ImplicitPathTypeConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImagePlusToOMEImageTypeConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImageToLUTTypeConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.ImplicitImageTypeConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.LUTToImageTypeConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToImagePlusTypeConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OmeImageToOMEXMLTypeConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.OMEImageToROITypeConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.algorithms.PlotToImageTypeConverter
 
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.color.ColorSpace
Converts the image into the current color space
convert(int, ColorSpace) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.color.ColorSpace
Converts a single pixel from its source image space into this one
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.HSBColorSpace
 
convert(int, ColorSpace) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.HSBColorSpace
 
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.LABColorSpace
 
convert(int, ColorSpace) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.LABColorSpace
 
convert(ImagePlus, ColorSpace, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.RGBColorSpace
 
convert(int, ColorSpace) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.RGBColorSpace
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.plots.converters.PlotToTableConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.strings.StringDataConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.tables.DoubleArrayColumnToTableConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.tables.StringArrayColumnToTableConverter
 
convert(JIPipeData) - Method in class org.hkijena.jipipe.extensions.utils.datatypes.PathDataToJIPipeOutputConverter
 
convert3ChannelToRGBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
ConvertAnnotationTableToAnnotatedTables - Class in org.hkijena.jipipe.extensions.tables.algorithms
Algorithm that integrates columns
ConvertAnnotationTableToAnnotatedTables(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ConvertAnnotationTableToAnnotatedTables
Creates a new instance
ConvertAnnotationTableToAnnotatedTables(ConvertAnnotationTableToAnnotatedTables) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ConvertAnnotationTableToAnnotatedTables
Creates a copy
ConvertColumnsAlgorithm - Class in org.hkijena.jipipe.extensions.tables.algorithms
Algorithm that integrates columns
ConvertColumnsAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ConvertColumnsAlgorithm
Creates a new instance
ConvertColumnsAlgorithm(ConvertColumnsAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.tables.algorithms.ConvertColumnsAlgorithm
Creates a copy
ConvertDataToOutputPath - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
ConvertDataToOutputPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertDataToOutputPath
 
ConvertDataToOutputPath(ConvertDataToOutputPath) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.ConvertDataToOutputPath
Copies the algorithm
ConverterAlgorithm - Class in org.hkijena.jipipe.extensions.utils.algorithms
Algorithm that converts any type to any other type
ConverterAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.ConverterAlgorithm
 
ConverterAlgorithm(JIPipeSimpleIteratingAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.utils.algorithms.ConverterAlgorithm
 
ConverterWrapperImageSource - Class in org.hkijena.jipipe.extensions.imagejdatatypes.util
 
ConverterWrapperImageSource(ImageSource, Function<ImagePlus, ImagePlus>) - Constructor for class org.hkijena.jipipe.extensions.imagejdatatypes.util.ConverterWrapperImageSource
 
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.color.ImagePlusColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.color.ImagePlus2DColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.greyscale.ImagePlus2DGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d2.ImagePlus2DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.color.ImagePlus3DColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.greyscale.ImagePlus3DGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d3.ImagePlus3DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.color.ImagePlus4DColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.greyscale.ImagePlus4DGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d4.ImagePlus4DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorHSBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorLABData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.color.ImagePlus5DColorRGBData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.greyscale.ImagePlus5DGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.d5.ImagePlus5DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT2DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT3DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT4DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFT5DData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.fft.ImagePlusFFTData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale16UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale32FData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscale8UData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.greyscale.ImagePlusGreyscaleMaskData
Converts the incoming image data into the current format.
convertFrom(ImagePlusData) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ImagePlusData
Converts the incoming image data into the current format.
convertGlobToRegex(String) - Static method in class org.hkijena.jipipe.utils.StringUtils
Converts a standard POSIX Shell globbing pattern into a regular expression pattern.
convertHSBToRGB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an HSB image to RGB (re-using the same components)
ConvertImageAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convert
 
ConvertImageAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convert.ConvertImageAlgorithm
 
ConvertImageAlgorithm(ConvertImageAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convert.ConvertImageAlgorithm
 
convertImageJToJIPipe(Object) - Method in interface org.hkijena.jipipe.api.compat.ImageJDatatypeAdapter
Converts an ImageJ data type to its corresponding JIPipe type
convertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageDataImageJAdapter
 
convertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataImageJAdapter
 
convertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImgPlusDataImageJAdapter
Converts ImagePlus to an ImagePlusData instance.
convertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageDataImageJAdapter
Converts ImagePlus to an ImagePlusData instance.
convertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ResultsTableDataImageJAdapter
Converts ResultsTable to ResultsTableData.
convertImageJToJIPipe(Object) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ROIDataImageJAdapter
Converts a RoiManager to ROIListData.
ConvertingColumnOperation - Interface in org.hkijena.jipipe.extensions.tables
A column operation that returns an output that has the same size as the input
ConvertingTableColumnProcessorParameter - Class in org.hkijena.jipipe.extensions.tables.parameters.processors
A parameter that models processing an input column via an conversion function and generating an output column
ConvertingTableColumnProcessorParameter() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ConvertingTableColumnProcessorParameter
 
ConvertingTableColumnProcessorParameter(ConvertingTableColumnProcessorParameter) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.processors.ConvertingTableColumnProcessorParameter
 
ConvertingTableColumnProcessorParameterList - Class in org.hkijena.jipipe.extensions.tables.parameters.collections
 
ConvertingTableColumnProcessorParameterList() - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ConvertingTableColumnProcessorParameterList
Creates a new instance
ConvertingTableColumnProcessorParameterList(ConvertingTableColumnProcessorParameterList) - Constructor for class org.hkijena.jipipe.extensions.tables.parameters.collections.ConvertingTableColumnProcessorParameterList
Creates a copy
convertJIPipeToImageJ(JIPipeData, boolean, boolean, String) - Method in interface org.hkijena.jipipe.api.compat.ImageJDatatypeAdapter
Converts a JIPipe data type to its corresponding ImageJ data type
convertJIPipeToImageJ(JIPipeData, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageDataImageJAdapter
 
convertJIPipeToImageJ(JIPipeData, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataImageJAdapter
 
convertJIPipeToImageJ(JIPipeData, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImgPlusDataImageJAdapter
 
convertJIPipeToImageJ(JIPipeData, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageDataImageJAdapter
 
convertJIPipeToImageJ(JIPipeData, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ResultsTableDataImageJAdapter
 
convertJIPipeToImageJ(JIPipeData, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ROIDataImageJAdapter
 
convertLABToRGB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an LAB image to RGB L is stored unsigned (0-255) A is stored signed (-128-127) B is stored signed (-128-127)
convertMergingToSingleDataBatches(List<JIPipeMergingDataBatch>) - Static method in class org.hkijena.jipipe.api.nodes.JIPipeMergingDataBatchBuilder
Builds a single data batch where each slot only can have one row
convertMultipleJIPipeToImageJ(List<JIPipeData>, boolean, boolean, String) - Method in interface org.hkijena.jipipe.api.compat.ImageJDatatypeAdapter
Converts multiple JIPipe data to their corresponding ImageJ data type.
convertMultipleJIPipeToImageJ(List<JIPipeData>, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.clij2.datatypes.CLIJImageDataImageJAdapter
 
convertMultipleJIPipeToImageJ(List<JIPipeData>, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.filesystem.compat.PathDataImageJAdapter
 
convertMultipleJIPipeToImageJ(List<JIPipeData>, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ImgPlusDataImageJAdapter
 
convertMultipleJIPipeToImageJ(List<JIPipeData>, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.OMEImageDataImageJAdapter
 
convertMultipleJIPipeToImageJ(List<JIPipeData>, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ResultsTableDataImageJAdapter
 
convertMultipleJIPipeToImageJ(List<JIPipeData>, boolean, boolean, String) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.compat.ROIDataImageJAdapter
 
convertRGBToHSB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an RGB image to HSB (re-using the same components)
convertRGBToLAB(ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an RGB image to LAB L is stored unsigned (0-255) A is stored signed (-128-127) B is stored signed (-128-127)
ConvertToAnnotationTable - Class in org.hkijena.jipipe.extensions.annotation.algorithms
Removes a specified annotation
ConvertToAnnotationTable(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
 
ConvertToAnnotationTable(ConvertToAnnotationTable) - Constructor for class org.hkijena.jipipe.extensions.annotation.algorithms.ConvertToAnnotationTable
Copies the algorithm
convertToColorHSBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToColorLABIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToColorRGBIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToGrayscale16UIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToGrayscale32FIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToGreyscale8UIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToGreyscaleIfNeeded(ImagePlus) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts an ImagePlus to the color space of this data.
convertToNumericColumn(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Converts the column into a numeric column.
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.color.ColorSpace
Converts the color image into RGB (in-place)
convertToRGB(int) - Method in interface org.hkijena.jipipe.extensions.imagejdatatypes.color.ColorSpace
Converts a single pixel from its source image space into RGB
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.HSBColorSpace
 
convertToRGB(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.HSBColorSpace
 
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.LABColorSpace
 
convertToRGB(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.LABColorSpace
 
convertToRGB(ImagePlus, JIPipeProgressInfo) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.RGBColorSpace
 
convertToRGB(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.color.RGBColorSpace
 
convertToSameTypeIfNeeded(ImagePlus, ImagePlus, boolean) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Converts this image to the same type as the other one if needed
convertToStringColumn(int) - Method in class org.hkijena.jipipe.extensions.tables.datatypes.ResultsTableData
Converts the column into a string column.
ConvexifyAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary
 
ConvexifyAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.ConvexifyAlgorithm
Instantiates a new node type.
ConvexifyAlgorithm(ConvexifyAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.binary.ConvexifyAlgorithm
Instantiates a new node type.
ConvolveByImage2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve
Wrapper around Convolver
ConvolveByImage2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve.ConvolveByImage2DAlgorithm
Instantiates a new node type.
ConvolveByImage2DAlgorithm(ConvolveByImage2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve.ConvolveByImage2DAlgorithm
Creates a copy
ConvolveByParameter2DAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve
Wrapper around Convolver
ConvolveByParameter2DAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve.ConvolveByParameter2DAlgorithm
Instantiates a new node type.
ConvolveByParameter2DAlgorithm(ConvolveByParameter2DAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.convolve.ConvolveByParameter2DAlgorithm
Creates a copy
copyBetweenImages(ImagePlus, ImagePlus, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
Copies all data from the source to the target image
copyBufferedImage(BufferedImage) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
copyBufferedImageToARGB(BufferedImage) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.util.ImageJUtils
CopyContainingFolderDataImportOperation - Class in org.hkijena.jipipe.extensions.core.data
Import operation that copies the containing folder path into the clipboard.
CopyContainingFolderDataImportOperation() - Constructor for class org.hkijena.jipipe.extensions.core.data.CopyContainingFolderDataImportOperation
 
copyCurrentSliceToClipboard() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.viewer.ImageViewerPanel
 
copyFrom(JIPipeDataByMetadataExporter) - Method in class org.hkijena.jipipe.extensions.settings.DataExporterSettings
Copies parameters into the settings storage
copyImage(BufferedImage) - Method in class org.hkijena.jipipe.utils.ui.CopyImageToClipboard
 
CopyImageToClipboard - Class in org.hkijena.jipipe.utils.ui
 
CopyImageToClipboard() - Constructor for class org.hkijena.jipipe.utils.ui.CopyImageToClipboard
 
copyMetadata(JIPipeDataSlotInfo) - Method in class org.hkijena.jipipe.api.data.JIPipeDataSlotInfo
Copies additional parameters such as custom names from the other slot
CopyNFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
CopyNFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.CopyNFunction
 
copyOrLink(Path, Path, JIPipeProgressInfo) - Static method in class org.hkijena.jipipe.utils.PathUtils
 
CopyPath - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
CopyPath(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
 
CopyPath(CopyPath) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.CopyPath
Copies the algorithm
CopyPathDataOperation - Class in org.hkijena.jipipe.extensions.filesystem.resultanalysis
 
CopyPathDataOperation() - Constructor for class org.hkijena.jipipe.extensions.filesystem.resultanalysis.CopyPathDataOperation
 
copySlotConfiguration(JIPipeGraphNode) - Method in class org.hkijena.jipipe.api.nodes.JIPipeGraphNode
Copies the slot configuration from the other algorithm to this algorithm Override this method for special configuration cases
copyTo(JIPipeDynamicParameterCollection) - Method in class org.hkijena.jipipe.api.parameters.JIPipeDynamicParameterCollection
Copies the parameter configuration into the target
copyToClipboard(String) - Static method in class org.hkijena.jipipe.utils.UIUtils
Copies the string to the clipboard
CoreExtension - Class in org.hkijena.jipipe.extensions.core
The core extension
CoreExtension() - Constructor for class org.hkijena.jipipe.extensions.core.CoreExtension
 
CosineColumnOperation - Class in org.hkijena.jipipe.extensions.tables.operations.converting
Applies a sine function
CosineColumnOperation() - Constructor for class org.hkijena.jipipe.extensions.tables.operations.converting.CosineColumnOperation
 
CountROIAlgorithm - Class in org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi
 
CountROIAlgorithm(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.CountROIAlgorithm
 
CountROIAlgorithm(CountROIAlgorithm) - Constructor for class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.roi.CountROIAlgorithm
 
countRoisOfType(int) - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Counts all ROIs of given type
createAddSlotButton(JIPipeSlotType) - Method in class org.hkijena.jipipe.ui.grapheditor.nodeui.JIPipeNodeUI
Function that creates the "Add slot" button
createAnnotation(String) - Method in class org.hkijena.jipipe.extensions.parameters.primitives.OptionalAnnotationNameParameter
Creates a new annotation with the defined name and value
createAnnotation(String[]) - Method in class org.hkijena.jipipe.extensions.parameters.primitives.OptionalAnnotationNameParameter
Creates a new annotation with the defined name and value
createAnnotation(Collection<String>) - Method in class org.hkijena.jipipe.extensions.parameters.primitives.OptionalAnnotationNameParameter
Creates a new annotation with the defined name and value
createAnnotation(JIPipeData) - Method in class org.hkijena.jipipe.extensions.parameters.primitives.OptionalDataAnnotationNameParameter
Creates a new annotation with the defined name and value
CreateArrayFunction - Class in org.hkijena.jipipe.extensions.expressions.functions
 
CreateArrayFunction() - Constructor for class org.hkijena.jipipe.extensions.expressions.functions.CreateArrayFunction
 
createCondaEnvironment(SelectCondaEnvPythonInstaller.Configuration) - Static method in class org.hkijena.jipipe.extensions.python.installers.SelectCondaEnvPythonInstaller
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.collections.ListParameter.Deserializer
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.functions.FunctionParameter.Deserializer
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.matrix.Matrix2D.Deserializer
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.optional.OptionalParameter.Deserializer
 
createContextual(DeserializationContext, BeanProperty) - Method in class org.hkijena.jipipe.extensions.parameters.pairs.PairParameter.Deserializer
 
createData(Class<T>, Object...) - Static method in class org.hkijena.jipipe.JIPipe
Instantiates a data class with the provided parameters This method is helpful if output data is constructed based on slot types
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.BoxAndWhiskerCategoryPlotData
 
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.CategoryPlotData
Creates a data set from the current series
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.PiePlotData
Creates a data set from the current series
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.StatisticalCategoryPlotData
 
createDataSet() - Method in class org.hkijena.jipipe.extensions.plots.datatypes.XYPlotData
Creates a data set from the current series
createDecreaseButton(int) - Method in class org.hkijena.jipipe.installer.linux.ui.utils.ArrowLessScrollBarUI
 
createDecreaseButton(int) - Method in class org.hkijena.jipipe.ui.theme.ArrowLessScrollBarUI
 
createDesktopImage() - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage
Convenience method to create a BufferedImage of the desktop
createDialog(Component) - Method in class org.hkijena.jipipe.ui.components.AdvancedFileChooser
 
CreateDirectory - Class in org.hkijena.jipipe.extensions.filesystem.algorithms
Applies subfolder navigation to each input folder
CreateDirectory(JIPipeNodeInfo) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.CreateDirectory
 
CreateDirectory(CreateDirectory) - Constructor for class org.hkijena.jipipe.extensions.filesystem.algorithms.CreateDirectory
Copies the algorithm
createDocumentation(String, String) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils
 
createDocumentation(String, String, Class<?>) - Static method in class org.hkijena.jipipe.utils.DocumentationUtils
 
createDummyImage() - Method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Creates a 2D 8-bit image that covers the region of all ROI
createDummyImageFor(Collection<ROIListData>) - Static method in class org.hkijena.jipipe.extensions.imagejdatatypes.datatypes.ROIListData
Creates a 2D 8-bit black image that covers the region of all provided ROI
createEditorFor(JIPipeWorkbench, JIPipeParameterAccess) - Method in class org.hkijena.jipipe.api.registries.JIPipeParameterTypeRegistry
Creates editor for the parameter
createEnvironment() - Method in class org.hkijena.jipipe.extensions.deeplearning.environments.DeepLearningToolkitLibraryEnvironmentInstaller
 
createEnvironment() - Method in class org.hkijena.jipipe.extensions.python.JIPipePythonAdapterLibraryEnvironmentInstaller
 
createEnvironment() - Method in class org.hkijena.jipipe.extensions.python.PythonPackageLibraryEnvironmentInstaller
 
createExporter(JIPipeProjectWorkbench, NodeGroup, String, HTMLText) - Static method in class org.hkijena.jipipe.ui.extensionbuilder.JIPipeJsonExporter
Creates a new exporter tab
createGradientLUT(Color, Color) - Static method in class org.hkijena.jipipe.extensions.imagejalgorithms.ij1.lut.SetLUTFromColorsAlgorithm
 
createIconTextHTMLTable(String, URL) - Static method in class org.hkijena.jipipe.installer.linux.ui.utils.StringUtils
Creates an HTML table with an icon and text.
createIconTextHTMLTable(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils
Creates an HTML table with an icon and text.
createIconTextHTMLTableElement(String, URL) - Static method in class org.hkijena.jipipe.installer.linux.ui.utils.StringUtils
Creates an HTML table with an icon and text.
createIconTextHTMLTableElement(String, URL) - Static method in class org.hkijena.jipipe.utils.StringUtils
Creates an HTML table with an icon and text.
createImage(JComponent) - Static method in class org.hkijena.jipipe.utils.ui.ScreenImage
Create a Buffered