JIPipe comes with a standard library of data types, algorithms, and other functionality that makes it ready to use for most common image analysis projects. The library of course can be extended with plugins.
Please take a look at the following standard library components:
This library provides integration of ImageJ data types, as well as common ImageJ algorithms.
The macro node allows to run ImageJ macros.
This library provides data types for that wrap filesystem objects, as well as algorithms to navigate the filesystem and extract information.
This library provides the ability to manage algorithm parameter sets, generate parameters iteratively, and apply algorithms to multiple parameters at once.
This library provides basic functionality to add annotations to data slot rows.
This library provides operations to generate and modify tables, as well as creating plots.
This library provides nodes that allow to run Python scripts via the Jython library
This library provides nodes that allow to run Python scripts.
This library provides nodes that allow to run R scripts.
Integrates the Cellpose tool into JIPipe.
Integrates Deep Learning capabilities (Tensorflow, Keras).