Tutorials
Are you new to JIPipe? Do you want to find out what this tool is about? Then watch our video abstract:
Tutorial list
You will find text and video tutorials in the following list. All tutorials are also available as playlist on YouTube.
- Image analysis pipeline (Video)
- JIPipe for ImageJ users (Video)
- Graph editor user interface (Video)
- How to do batch processing (Video)
This step-by-step tutorial explains how to create an image analysis workflow with simple algorithms like Gaussian blur, auto thresholding, and distance transform watershed. The segmented objects are quantified and plots are genereated.
This step-by-step video tutorial explains how to create an image analysis workflow with simple algorithms like Gaussian blur, auto thresholding, and distance transform watershed. The segmented objects are quantified and plots are genereated.
This step-by-step tutorial explains how to create an JIPipe extension from parts of an existing pipeline without the need for programming.
This video explains the basics of creating pipelines in JIPipe - aimed towards users already familiar with ImageJ.
This video explains the basics of the JIPipe user interface.
This video explains the basics of the caching system.
This video explains the basics of the graph editor user interface.
This video explains how to create a batch processing pipeline.